Protein–RNA interactions for Protein: P42338

PIK3CB, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CBP42338 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PIK3CBP42338 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PIK3CBP42338 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PIK3CBP42338 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.26□□□□□ -0.13
PIK3CBP42338 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.26□□□□□ -0.13
PIK3CBP42338 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.26□□□□□ -0.13
PIK3CBP42338 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.26□□□□□ -0.13
PIK3CBP42338 AC132938.2-201ENST00000579188 680 ntBASIC14.26□□□□□ -0.13
PIK3CBP42338 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.26□□□□□ -0.13
PIK3CBP42338 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.26□□□□□ -0.13
PIK3CBP42338 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PIK3CBP42338 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PIK3CBP42338 AL591163.1-201ENST00000641757 987 ntBASIC14.26□□□□□ -0.13
PIK3CBP42338 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PIK3CBP42338 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PIK3CBP42338 AC015656.1-201ENST00000624209 3578 ntBASIC14.26□□□□□ -0.13
PIK3CBP42338 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.26□□□□□ -0.13
PIK3CBP42338 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PIK3CBP42338 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PIK3CBP42338 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PIK3CBP42338 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.26□□□□□ -0.13
PIK3CBP42338 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.26□□□□□ -0.13
PIK3CBP42338 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PIK3CBP42338 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
PIK3CBP42338 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PIK3CBP42338 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
PIK3CBP42338 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.26□□□□□ -0.13
PIK3CBP42338 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.26□□□□□ -0.13
PIK3CBP42338 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PIK3CBP42338 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
PIK3CBP42338 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.25□□□□□ -0.13
PIK3CBP42338 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.25□□□□□ -0.13
PIK3CBP42338 AC097359.2-201ENST00000604992 2389 ntBASIC14.25□□□□□ -0.13
PIK3CBP42338 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PIK3CBP42338 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.25□□□□□ -0.13
PIK3CBP42338 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PIK3CBP42338 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PIK3CBP42338 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PIK3CBP42338 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.25□□□□□ -0.13
PIK3CBP42338 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.25□□□□□ -0.13
PIK3CBP42338 COX5BP8-201ENST00000416911 349 ntBASIC14.25□□□□□ -0.13
PIK3CBP42338 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.25□□□□□ -0.13
PIK3CBP42338 NME2P1-201ENST00000426182 414 ntBASIC14.25□□□□□ -0.13
PIK3CBP42338 AC016694.1-201ENST00000434179 700 ntBASIC14.25□□□□□ -0.13
PIK3CBP42338 BCRP2-202ENST00000447763 634 ntBASIC14.25□□□□□ -0.13
PIK3CBP42338 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 BCRP6-201ENST00000510112 632 ntBASIC14.25□□□□□ -0.13
PIK3CBP42338 BCRP7-201ENST00000511549 544 ntBASIC14.25□□□□□ -0.13
PIK3CBP42338 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.25□□□□□ -0.13
PIK3CBP42338 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.25□□□□□ -0.13
PIK3CBP42338 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.25□□□□□ -0.13
PIK3CBP42338 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.25□□□□□ -0.13
PIK3CBP42338 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
PIK3CBP42338 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PIK3CBP42338 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PIK3CBP42338 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.25□□□□□ -0.13
PIK3CBP42338 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.25□□□□□ -0.13
PIK3CBP42338 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PIK3CBP42338 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PIK3CBP42338 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.25□□□□□ -0.13
PIK3CBP42338 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.25□□□□□ -0.13
PIK3CBP42338 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PIK3CBP42338 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3CBP42338 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.25□□□□□ -0.13
PIK3CBP42338 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PIK3CBP42338 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.24□□□□□ -0.13
PIK3CBP42338 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
PIK3CBP42338 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PIK3CBP42338 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PIK3CBP42338 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PIK3CBP42338 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PIK3CBP42338 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PIK3CBP42338 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
PIK3CBP42338 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PIK3CBP42338 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PIK3CBP42338 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PIK3CBP42338 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms