Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CDKN1AP38936 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.68□□□□□ -0.38
CDKN1AP38936 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.68□□□□□ -0.38
CDKN1AP38936 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.68□□□□□ -0.38
CDKN1AP38936 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.68□□□□□ -0.38
CDKN1AP38936 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.68□□□□□ -0.38
CDKN1AP38936 AC134698.3-201ENST00000523880 214 ntBASIC12.68□□□□□ -0.38
CDKN1AP38936 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.68□□□□□ -0.38
CDKN1AP38936 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.68□□□□□ -0.38
CDKN1AP38936 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
CDKN1AP38936 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.68□□□□□ -0.38
CDKN1AP38936 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 AC138696.2-201ENST00000607376 223 ntBASIC12.68□□□□□ -0.38
CDKN1AP38936 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.68□□□□□ -0.38
CDKN1AP38936 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.68□□□□□ -0.38
CDKN1AP38936 AC007326.2-201ENST00000624224 7579 ntBASIC12.68□□□□□ -0.38
CDKN1AP38936 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CDKN1AP38936 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CDKN1AP38936 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.68□□□□□ -0.38
CDKN1AP38936 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.68□□□□□ -0.38
CDKN1AP38936 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.68□□□□□ -0.38
CDKN1AP38936 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 AL137784.3-201ENST00000623858 2288 ntBASIC12.68□□□□□ -0.38
CDKN1AP38936 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 AC007686.3-201ENST00000619017 3487 ntBASIC12.68□□□□□ -0.38
CDKN1AP38936 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CDKN1AP38936 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.68□□□□□ -0.38
CDKN1AP38936 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDKN1AP38936 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CDKN1AP38936 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.67□□□□□ -0.38
CDKN1AP38936 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.67□□□□□ -0.38
CDKN1AP38936 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12.67□□□□□ -0.38
CDKN1AP38936 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.67□□□□□ -0.38
CDKN1AP38936 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CDKN1AP38936 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.67□□□□□ -0.38
CDKN1AP38936 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CDKN1AP38936 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CDKN1AP38936 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CDKN1AP38936 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.67□□□□□ -0.38
CDKN1AP38936 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.67□□□□□ -0.38
CDKN1AP38936 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.67□□□□□ -0.38
CDKN1AP38936 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.67□□□□□ -0.38
CDKN1AP38936 AC024681.1-201ENST00000521917 487 ntBASIC12.67□□□□□ -0.38
CDKN1AP38936 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.67□□□□□ -0.38
CDKN1AP38936 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.67□□□□□ -0.38
CDKN1AP38936 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.67□□□□□ -0.38
CDKN1AP38936 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.67□□□□□ -0.38
CDKN1AP38936 RN7SL574P-201ENST00000581512 297 ntBASIC12.67□□□□□ -0.38
CDKN1AP38936 AC009955.4-201ENST00000597192 544 ntBASIC12.67□□□□□ -0.38
CDKN1AP38936 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.67□□□□□ -0.38
CDKN1AP38936 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 AC090164.2-201ENST00000611487 516 ntBASIC12.67□□□□□ -0.38
CDKN1AP38936 AL136295.7-201ENST00000619226 1200 ntBASIC12.67□□□□□ -0.38
CDKN1AP38936 AC100757.4-201ENST00000626934 759 ntBASIC12.67□□□□□ -0.38
CDKN1AP38936 AC068587.8-201ENST00000641239 219 ntBASIC12.67□□□□□ -0.38
CDKN1AP38936 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.67□□□□□ -0.38
CDKN1AP38936 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CDKN1AP38936 AC087481.3-201ENST00000602886 1894 ntBASIC12.67□□□□□ -0.38
CDKN1AP38936 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms