Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.43□□□□□ -0.26
GDF1P27539 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.43□□□□□ -0.26
GDF1P27539 AC005740.2-201ENST00000511085 419 ntBASIC13.43□□□□□ -0.26
GDF1P27539 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
GDF1P27539 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDF1P27539 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
GDF1P27539 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.43□□□□□ -0.26
GDF1P27539 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.43□□□□□ -0.26
GDF1P27539 AC132192.2-201ENST00000596206 1147 ntBASIC13.43□□□□□ -0.26
GDF1P27539 AC009955.4-201ENST00000597192 544 ntBASIC13.43□□□□□ -0.26
GDF1P27539 AL451050.2-201ENST00000606967 682 ntBASIC13.43□□□□□ -0.26
GDF1P27539 AJ011931.1-201ENST00000618749 2492 ntBASIC13.43□□□□□ -0.26
GDF1P27539 AL162426.1-201ENST00000624141 743 ntBASIC13.43□□□□□ -0.26
GDF1P27539 DBET-201ENST00000630918 3363 ntBASIC13.43□□□□□ -0.26
GDF1P27539 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDF1P27539 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDF1P27539 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GDF1P27539 AC092135.3-201ENST00000624151 1846 ntBASIC13.43□□□□□ -0.26
GDF1P27539 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDF1P27539 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDF1P27539 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDF1P27539 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDF1P27539 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDF1P27539 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDF1P27539 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
GDF1P27539 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDF1P27539 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.43□□□□□ -0.26
GDF1P27539 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDF1P27539 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
GDF1P27539 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
GDF1P27539 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.42□□□□□ -0.26
GDF1P27539 MRPL37P1-201ENST00000592451 1337 ntBASIC13.42□□□□□ -0.26
GDF1P27539 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.42□□□□□ -0.26
GDF1P27539 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.42□□□□□ -0.26
GDF1P27539 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.42□□□□□ -0.26
GDF1P27539 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.42□□□□□ -0.26
GDF1P27539 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
GDF1P27539 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
GDF1P27539 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.42□□□□□ -0.26
GDF1P27539 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.42□□□□□ -0.26
GDF1P27539 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
GDF1P27539 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
GDF1P27539 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.42□□□□□ -0.26
GDF1P27539 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.42□□□□□ -0.26
GDF1P27539 FAM58BP-201ENST00000439056 645 ntBASIC13.42□□□□□ -0.26
GDF1P27539 EIF4HP1-201ENST00000453115 687 ntBASIC13.42□□□□□ -0.26
GDF1P27539 SCARNA20.5-201ENST00000516991 142 ntBASIC13.42□□□□□ -0.26
GDF1P27539 AC044849.1-201ENST00000519737 1188 ntBASIC13.42□□□□□ -0.26
GDF1P27539 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.42□□□□□ -0.26
GDF1P27539 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.42□□□□□ -0.26
GDF1P27539 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.42□□□□□ -0.26
GDF1P27539 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.42□□□□□ -0.26
GDF1P27539 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.42□□□□□ -0.26
GDF1P27539 BX088702.1-201ENST00000610784 235 ntBASIC13.42□□□□□ -0.26
GDF1P27539 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.42□□□□□ -0.26
GDF1P27539 AC027601.3-201ENST00000622907 509 ntBASIC13.42□□□□□ -0.26
GDF1P27539 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.42□□□□□ -0.26
GDF1P27539 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.42□□□□□ -0.26
GDF1P27539 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.42□□□□□ -0.26
GDF1P27539 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
GDF1P27539 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GDF1P27539 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.42□□□□□ -0.26
GDF1P27539 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
GDF1P27539 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
GDF1P27539 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
GDF1P27539 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
GDF1P27539 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
GDF1P27539 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms