Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC13.83□□□□□ -0.2
COL5A1P20908 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.83□□□□□ -0.2
COL5A1P20908 TRMT112P3-201ENST00000580149 358 ntBASIC13.83□□□□□ -0.2
COL5A1P20908 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC13.83□□□□□ -0.2
COL5A1P20908 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.83□□□□□ -0.2
COL5A1P20908 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL5A1P20908 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
COL5A1P20908 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.83□□□□□ -0.2
COL5A1P20908 FTX-216ENST00000638985 1367 ntTSL 5 BASIC13.83□□□□□ -0.2
COL5A1P20908 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.83□□□□□ -0.2
COL5A1P20908 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL5A1P20908 CICP23-201ENST00000605013 2741 ntBASIC13.83□□□□□ -0.2
COL5A1P20908 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL5A1P20908 AL390755.1-201ENST00000623716 2027 ntBASIC13.83□□□□□ -0.2
COL5A1P20908 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL5A1P20908 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL5A1P20908 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL5A1P20908 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL5A1P20908 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL5A1P20908 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL5A1P20908 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
COL5A1P20908 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL5A1P20908 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL5A1P20908 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.83□□□□□ -0.2
COL5A1P20908 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.83□□□□□ -0.2
COL5A1P20908 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL5A1P20908 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL5A1P20908 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
COL5A1P20908 AC006987.1-201ENST00000413610 527 ntBASIC13.83□□□□□ -0.2
COL5A1P20908 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL5A1P20908 AC108734.2-201ENST00000420887 1069 ntBASIC13.83□□□□□ -0.2
COL5A1P20908 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC13.83□□□□□ -0.2
COL5A1P20908 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC13.83□□□□□ -0.2
COL5A1P20908 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC13.83□□□□□ -0.2
COL5A1P20908 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC13.83□□□□□ -0.2
COL5A1P20908 AC012158.2-201ENST00000536546 354 ntBASIC13.83□□□□□ -0.2
COL5A1P20908 KLF17P1-201ENST00000547105 1126 ntBASIC13.83□□□□□ -0.2
COL5A1P20908 AP005264.6-204ENST00000588436 719 ntBASIC13.83□□□□□ -0.2
COL5A1P20908 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC13.83□□□□□ -0.2
COL5A1P20908 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
COL5A1P20908 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.83□□□□□ -0.2
COL5A1P20908 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL5A1P20908 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL5A1P20908 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
COL5A1P20908 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL5A1P20908 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.82□□□□□ -0.2
COL5A1P20908 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.82□□□□□ -0.2
COL5A1P20908 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
COL5A1P20908 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.82□□□□□ -0.2
COL5A1P20908 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.82□□□□□ -0.2
COL5A1P20908 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 AC015688.4-201ENST00000580780 1647 ntBASIC13.82□□□□□ -0.2
COL5A1P20908 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.82□□□□□ -0.2
COL5A1P20908 SURF4-203ENST00000371991 715 ntTSL 3 BASIC13.82□□□□□ -0.2
COL5A1P20908 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC13.82□□□□□ -0.2
COL5A1P20908 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.82□□□□□ -0.2
COL5A1P20908 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC13.82□□□□□ -0.2
COL5A1P20908 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.82□□□□□ -0.2
COL5A1P20908 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.82□□□□□ -0.2
COL5A1P20908 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.82□□□□□ -0.2
COL5A1P20908 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC13.82□□□□□ -0.2
COL5A1P20908 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.82□□□□□ -0.2
COL5A1P20908 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.82□□□□□ -0.2
COL5A1P20908 AC226150.1-201ENST00000544259 466 ntBASIC13.82□□□□□ -0.2
COL5A1P20908 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.82□□□□□ -0.2
COL5A1P20908 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.82□□□□□ -0.2
COL5A1P20908 LINC00244-201ENST00000625073 613 ntBASIC13.82□□□□□ -0.2
COL5A1P20908 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC13.82□□□□□ -0.2
COL5A1P20908 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
COL5A1P20908 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.82□□□□□ -0.2
COL5A1P20908 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC13.82□□□□□ -0.2
COL5A1P20908 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
COL5A1P20908 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL5A1P20908 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
COL5A1P20908 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL5A1P20908 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
COL5A1P20908 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC13.81□□□□□ -0.2
COL5A1P20908 AC103702.1-201ENST00000548801 2630 ntBASIC13.81□□□□□ -0.2
COL5A1P20908 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL5A1P20908 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL5A1P20908 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL5A1P20908 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.81□□□□□ -0.2
COL5A1P20908 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms