Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 C2orf27AP3-201ENST00000434123 579 ntBASIC13.3□□□□□ -0.28
HLA-DOBP13765 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 KRT17P7-201ENST00000451704 1104 ntBASIC13.3□□□□□ -0.28
HLA-DOBP13765 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 AL354718.3-201ENST00000616414 581 ntBASIC13.3□□□□□ -0.28
HLA-DOBP13765 CR382287.1-201ENST00000623954 586 ntBASIC13.3□□□□□ -0.28
HLA-DOBP13765 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 AC016694.1-201ENST00000434179 700 ntBASIC13.29□□□□□ -0.28
HLA-DOBP13765 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 CROCCP4-201ENST00000457096 498 ntBASIC13.29□□□□□ -0.28
HLA-DOBP13765 AC007551.1-201ENST00000457394 519 ntBASIC13.29□□□□□ -0.28
HLA-DOBP13765 GCOM2-201ENST00000509133 1104 ntBASIC13.29□□□□□ -0.28
HLA-DOBP13765 RNA5SP486-201ENST00000515961 83 ntBASIC13.29□□□□□ -0.28
HLA-DOBP13765 AP003171.2-201ENST00000528208 925 ntBASIC13.29□□□□□ -0.28
HLA-DOBP13765 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 AC078819.1-201ENST00000547454 765 ntBASIC13.29□□□□□ -0.28
HLA-DOBP13765 AC012085.1-201ENST00000548270 765 ntBASIC13.29□□□□□ -0.28
HLA-DOBP13765 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 AC106820.3-201ENST00000561653 397 ntBASIC13.29□□□□□ -0.28
HLA-DOBP13765 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 AC012645.4-201ENST00000610691 1061 ntBASIC13.29□□□□□ -0.28
HLA-DOBP13765 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 MRPL37P1-201ENST00000592451 1337 ntBASIC13.29□□□□□ -0.28
HLA-DOBP13765 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HLA-DOBP13765 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DOBP13765 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms