Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SFTPBP07988 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
SFTPBP07988 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 AL157414.3-201ENST00000624276 1954 ntBASIC12.99□□□□□ -0.33
SFTPBP07988 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.99□□□□□ -0.33
SFTPBP07988 BX640514.1-201ENST00000583223 1918 ntBASIC12.99□□□□□ -0.33
SFTPBP07988 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SFTPBP07988 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 MIR193BHG-211ENST00000641433 5365 ntBASIC12.99□□□□□ -0.33
SFTPBP07988 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SFTPBP07988 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
SFTPBP07988 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.99□□□□□ -0.33
SFTPBP07988 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.99□□□□□ -0.33
SFTPBP07988 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.99□□□□□ -0.33
SFTPBP07988 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.98□□□□□ -0.33
SFTPBP07988 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.98□□□□□ -0.33
SFTPBP07988 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.98□□□□□ -0.33
SFTPBP07988 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 AL391825.1-201ENST00000457671 1364 ntBASIC12.98□□□□□ -0.33
SFTPBP07988 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
SFTPBP07988 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.98□□□□□ -0.33
SFTPBP07988 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SFTPBP07988 AC097359.2-201ENST00000604992 2389 ntBASIC12.98□□□□□ -0.33
SFTPBP07988 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SFTPBP07988 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.98□□□□□ -0.33
SFTPBP07988 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SFTPBP07988 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.98□□□□□ -0.33
SFTPBP07988 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.98□□□□□ -0.33
SFTPBP07988 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.98□□□□□ -0.33
SFTPBP07988 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
SFTPBP07988 DGCR5-201ENST00000399539 862 ntBASIC12.98□□□□□ -0.33
SFTPBP07988 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.98□□□□□ -0.33
SFTPBP07988 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SFTPBP07988 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.98□□□□□ -0.33
SFTPBP07988 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SFTPBP07988 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SFTPBP07988 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.98□□□□□ -0.33
SFTPBP07988 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.98□□□□□ -0.33
SFTPBP07988 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
SFTPBP07988 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.98□□□□□ -0.33
SFTPBP07988 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.98□□□□□ -0.33
SFTPBP07988 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.98□□□□□ -0.33
SFTPBP07988 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.98□□□□□ -0.33
SFTPBP07988 AL358472.5-202ENST00000641448 1267 ntBASIC12.98□□□□□ -0.33
SFTPBP07988 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.98□□□□□ -0.33
SFTPBP07988 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SFTPBP07988 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
SFTPBP07988 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.98□□□□□ -0.33
SFTPBP07988 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.98□□□□□ -0.33
SFTPBP07988 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SFTPBP07988 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.97□□□□□ -0.33
SFTPBP07988 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.97□□□□□ -0.33
SFTPBP07988 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SFTPBP07988 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms