Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.32□□□□□ -0.12
CPNE3O75131 HSPB1P2-201ENST00000448722 546 ntBASIC14.32□□□□□ -0.12
CPNE3O75131 AC004898.1-201ENST00000451057 766 ntBASIC14.32□□□□□ -0.12
CPNE3O75131 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.32□□□□□ -0.12
CPNE3O75131 AL391280.1-201ENST00000506969 1062 ntBASIC14.32□□□□□ -0.12
CPNE3O75131 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.32□□□□□ -0.12
CPNE3O75131 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CPNE3O75131 AC106820.3-201ENST00000561653 397 ntBASIC14.32□□□□□ -0.12
CPNE3O75131 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.32□□□□□ -0.12
CPNE3O75131 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.32□□□□□ -0.12
CPNE3O75131 AC073413.1-201ENST00000603927 732 ntBASIC14.32□□□□□ -0.12
CPNE3O75131 AC138466.3-201ENST00000619983 221 ntBASIC14.32□□□□□ -0.12
CPNE3O75131 AC244452.3-201ENST00000636814 210 ntBASIC14.32□□□□□ -0.12
CPNE3O75131 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CPNE3O75131 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CPNE3O75131 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CPNE3O75131 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CPNE3O75131 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CPNE3O75131 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.32□□□□□ -0.12
CPNE3O75131 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.32□□□□□ -0.12
CPNE3O75131 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.32□□□□□ -0.12
CPNE3O75131 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CPNE3O75131 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CPNE3O75131 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CPNE3O75131 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CPNE3O75131 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 AC012508.2-201ENST00000567613 1472 ntBASIC14.31□□□□□ -0.12
CPNE3O75131 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.31□□□□□ -0.12
CPNE3O75131 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.31□□□□□ -0.12
CPNE3O75131 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.31□□□□□ -0.12
CPNE3O75131 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.31□□□□□ -0.12
CPNE3O75131 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.31□□□□□ -0.12
CPNE3O75131 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CPNE3O75131 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.31□□□□□ -0.12
CPNE3O75131 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.31□□□□□ -0.12
CPNE3O75131 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.31□□□□□ -0.12
CPNE3O75131 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.31□□□□□ -0.12
CPNE3O75131 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.31□□□□□ -0.12
CPNE3O75131 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.31□□□□□ -0.12
CPNE3O75131 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.31□□□□□ -0.12
CPNE3O75131 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.31□□□□□ -0.12
CPNE3O75131 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.31□□□□□ -0.12
CPNE3O75131 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 AC006486.2-201ENST00000624246 2199 ntBASIC14.31□□□□□ -0.12
CPNE3O75131 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.31□□□□□ -0.12
CPNE3O75131 CLUHP2-201ENST00000426660 1303 ntBASIC14.31□□□□□ -0.12
CPNE3O75131 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.31□□□□□ -0.12
CPNE3O75131 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.31□□□□□ -0.12
CPNE3O75131 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
CPNE3O75131 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.31□□□□□ -0.12
CPNE3O75131 CICP20-201ENST00000443330 2801 ntBASIC14.31□□□□□ -0.12
CPNE3O75131 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CPNE3O75131 KRT8P4-201ENST00000509735 1454 ntBASIC14.31□□□□□ -0.12
CPNE3O75131 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.31□□□□□ -0.12
CPNE3O75131 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE3O75131 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.31□□□□□ -0.12
CPNE3O75131 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CPNE3O75131 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
CPNE3O75131 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE3O75131 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.3□□□□□ -0.12
CPNE3O75131 AC005252.3-201ENST00000623855 2258 ntBASIC14.3□□□□□ -0.12
CPNE3O75131 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms