Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 RN7SKP230-201ENST00000365642 335 ntBASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 AL136309.1-201ENST00000403917 691 ntBASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 AC004945.1-201ENST00000416738 983 ntBASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 AL591846.1-201ENST00000451736 433 ntBASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 AC005695.3-201ENST00000614522 232 ntBASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 OR2I1P-210ENST00000642037 4691 ntBASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 AC139749.1-202ENST00000617529 3139 ntBASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 AC011840.2-201ENST00000563063 1520 ntBASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 RN7SKP175-201ENST00000408472 289 ntBASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 CHMP1AP1-201ENST00000445563 662 ntBASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 HIST2H2BB-201ENST00000449108 381 ntBASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 FAM8A2P-201ENST00000528813 1142 ntBASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 AC244157.2-201ENST00000616239 1006 ntBASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 BX640514.1-201ENST00000583223 1918 ntBASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 INE2-201ENST00000630399 1874 ntBASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 AC097359.2-201ENST00000604992 2389 ntBASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
COL4A3BPQ9Y5P4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms