Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 Z93015.1-201ENST00000451718 390 ntBASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 RPSAP36-202ENST00000494591 1261 ntBASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 FAM86HP-204ENST00000513466 959 ntBASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 AC009093.10-201ENST00000641956 1442 ntBASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 AL354877.1-201ENST00000424412 413 ntBASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 MTX1P1-201ENST00000440904 838 ntBASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 HSPB1P2-201ENST00000448722 546 ntBASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 MIR6074-201ENST00000612054 107 ntBASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 TUBB1P2-201ENST00000422712 1306 ntBASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 TUBB1P1-201ENST00000503144 1300 ntBASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 AC139749.1-202ENST00000617529 3139 ntBASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA4Q9UN74 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PCDHA4Q9UN74 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA4Q9UN74 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA4Q9UN74 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA4Q9UN74 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA4Q9UN74 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA4Q9UN74 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA4Q9UN74 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA4Q9UN74 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
PCDHA4Q9UN74 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHA4Q9UN74 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA4Q9UN74 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA4Q9UN74 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA4Q9UN74 MYO15B-237ENST00000642007 4893 ntBASIC16.85■□□□□ 0.29
PCDHA4Q9UN74 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDHA4Q9UN74 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms