Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 KRT17P4-201ENST00000429445 819 ntBASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 AL161932.2-201ENST00000435436 679 ntBASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 OR2A1-AS1-210ENST00000496968 531 ntBASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 SNORD3B-1-201ENST00000577988 758 ntBASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC52A1Q9NWF4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 COX20P1-201ENST00000366529 357 ntBASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 AC006987.1-201ENST00000413610 527 ntBASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 BX679664.3-201ENST00000414070 555 ntBASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 AC113935.1-201ENST00000471722 555 ntBASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 PGAM1P12-201ENST00000505622 748 ntBASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 AL021707.6-201ENST00000609212 491 ntBASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A1Q9NWF4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 SORD2P-201ENST00000558556 1069 ntBASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC52A1Q9NWF4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC52A1Q9NWF4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC52A1Q9NWF4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SLC52A1Q9NWF4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SLC52A1Q9NWF4 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC52A1Q9NWF4 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC52A1Q9NWF4 AC108734.2-201ENST00000420887 1069 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms