Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 DUX4L46-201ENST00000566845 751 ntBASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 MIR4741-201ENST00000579822 90 ntBASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 AC017083.2-201ENST00000608069 979 ntBASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 AC133552.6-201ENST00000613406 534 ntBASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 AC016397.2-201ENST00000624848 1985 ntBASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 AL928921.2-201ENST00000641325 2442 ntBASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 AL035414.1-201ENST00000451327 857 ntBASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 BNIP3P42-201ENST00000454982 569 ntBASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 BNIP3P29-201ENST00000598302 571 ntBASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 AC239800.4-201ENST00000603712 296 ntBASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 MIR6805-201ENST00000615055 62 ntBASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 AC011447.5-201ENST00000616168 564 ntBASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.38■□□□□ 0.21
BLOC1S4Q9NUP1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 TMBIM7P-202ENST00000641474 1516 ntBASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 AL645933.1-201ENST00000440087 609 ntBASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 KLF2P1-201ENST00000447438 1042 ntBASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 AC027237.1-201ENST00000560942 655 ntBASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 AC009542.2-202ENST00000619004 1067 ntBASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BLOC1S4Q9NUP1 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms