Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 HSPA7-201ENST00000445535 1927 ntBASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 TUBB8P8-201ENST00000458717 1058 ntBASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 RN7SL11P-201ENST00000471305 293 ntBASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 MARK2P5-201ENST00000507649 634 ntBASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 AC024681.1-201ENST00000521917 487 ntBASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 AL162426.1-201ENST00000624141 743 ntBASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 AL354702.1-201ENST00000442006 1960 ntBASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPAP1Q9BWH6 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 AC008132.1-202ENST00000342005 1389 ntBASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 INE2-201ENST00000630399 1874 ntBASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 AC010141.1-201ENST00000411585 623 ntBASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 RN7SL774P-201ENST00000577467 290 ntBASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 AC005324.6-201ENST00000587972 613 ntBASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPAP1Q9BWH6 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms