Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 AL021368.1-201ENST00000607490 540 ntBASIC13.47□□□□□ -0.25
USB1Q9BQ65 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 AC136621.1-201ENST00000624017 2304 ntBASIC13.47□□□□□ -0.25
USB1Q9BQ65 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
USB1Q9BQ65 AC027612.1-201ENST00000445234 2395 ntBASIC13.46□□□□□ -0.25
USB1Q9BQ65 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
USB1Q9BQ65 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
USB1Q9BQ65 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
USB1Q9BQ65 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
USB1Q9BQ65 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
USB1Q9BQ65 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
USB1Q9BQ65 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
USB1Q9BQ65 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
USB1Q9BQ65 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
USB1Q9BQ65 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
USB1Q9BQ65 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
USB1Q9BQ65 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
USB1Q9BQ65 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 MIR1909-201ENST00000411312 80 ntBASIC13.46□□□□□ -0.25
USB1Q9BQ65 CD8B2-202ENST00000417670 633 ntBASIC13.46□□□□□ -0.25
USB1Q9BQ65 RPS2P32-201ENST00000439199 892 ntBASIC13.46□□□□□ -0.25
USB1Q9BQ65 BCRP2-202ENST00000447763 634 ntBASIC13.46□□□□□ -0.25
USB1Q9BQ65 BCRP6-201ENST00000510112 632 ntBASIC13.46□□□□□ -0.25
USB1Q9BQ65 BCRP7-201ENST00000511549 544 ntBASIC13.46□□□□□ -0.25
USB1Q9BQ65 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.46□□□□□ -0.25
USB1Q9BQ65 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
USB1Q9BQ65 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
USB1Q9BQ65 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
USB1Q9BQ65 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
USB1Q9BQ65 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
USB1Q9BQ65 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
USB1Q9BQ65 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
USB1Q9BQ65 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
USB1Q9BQ65 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
USB1Q9BQ65 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
USB1Q9BQ65 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
USB1Q9BQ65 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
USB1Q9BQ65 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
USB1Q9BQ65 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
USB1Q9BQ65 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
USB1Q9BQ65 AC127383.1-201ENST00000444697 1800 ntBASIC13.46□□□□□ -0.26
USB1Q9BQ65 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
USB1Q9BQ65 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
USB1Q9BQ65 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.46□□□□□ -0.26
USB1Q9BQ65 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
USB1Q9BQ65 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
USB1Q9BQ65 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
USB1Q9BQ65 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
USB1Q9BQ65 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
USB1Q9BQ65 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
USB1Q9BQ65 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
USB1Q9BQ65 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
USB1Q9BQ65 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
USB1Q9BQ65 KRT8P35-201ENST00000483942 1338 ntBASIC13.45□□□□□ -0.26
USB1Q9BQ65 AL117378.2-201ENST00000622916 1337 ntBASIC13.45□□□□□ -0.26
USB1Q9BQ65 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
USB1Q9BQ65 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.45□□□□□ -0.26
USB1Q9BQ65 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
USB1Q9BQ65 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
USB1Q9BQ65 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
USB1Q9BQ65 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms