Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 HNRNPA1P27-201ENST00000412087 955 ntBASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 PAM16-211ENST00000575848 518 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 AC092299.1-201ENST00000632679 757 ntBASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC85AQ96PX6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 MRPL37P1-201ENST00000592451 1337 ntBASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 TCAF2P1-201ENST00000291129 2421 ntBASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 KRT8P21-201ENST00000430398 1491 ntBASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 AJ011931.1-201ENST00000618749 2492 ntBASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC85AQ96PX6 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 F10-203ENST00000409306 1450 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 AC078875.1-201ENST00000431907 724 ntBASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms