Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 MIR600HG-201ENST00000449175 5984 ntBASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 MARK2P5-201ENST00000507649 634 ntBASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 AC024681.1-201ENST00000521917 487 ntBASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 FGFR3P5-201ENST00000564496 886 ntBASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 AC027601.3-201ENST00000622907 509 ntBASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A1Q93050 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 CICP12-201ENST00000455801 843 ntBASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 RPL18P13-201ENST00000478088 569 ntBASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0A1Q93050 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
ATP6V0A1Q93050 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP6V0A1Q93050 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATP6V0A1Q93050 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
ATP6V0A1Q93050 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATP6V0A1Q93050 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP6V0A1Q93050 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.52■□□□□ 0.24
ATP6V0A1Q93050 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms