Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 AC232323.1-201ENST00000540724 2099 ntBASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 RN7SKP175-201ENST00000408472 289 ntBASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 AC023310.1-201ENST00000554836 735 ntBASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 MIR4741-201ENST00000579822 90 ntBASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 RN7SL713P-201ENST00000582127 302 ntBASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC82Q8N4S0 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 AP000593.2-201ENST00000542775 1433 ntBASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 AC023908.3-201ENST00000564211 3047 ntBASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 AC008687.7-202ENST00000637404 953 ntBASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCDC82Q8N4S0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms