Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 AL773604.1-201ENST00000617417 272 ntBASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 HSPA8P5-201ENST00000456928 2069 ntBASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LYSMD2Q8IV50 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 AC112191.1-201ENST00000523689 701 ntBASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 AC026979.3-201ENST00000607315 403 ntBASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LYSMD2Q8IV50 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LYSMD2Q8IV50 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
LYSMD2Q8IV50 PCDHB19P-202ENST00000625133 2914 ntBASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms