Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 NAP1L6-202ENST00000641404 1222 ntBASIC17.33■□□□□ 0.36
IRX3P78415 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IRX3P78415 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IRX3P78415 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
IRX3P78415 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.33■□□□□ 0.36
IRX3P78415 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
IRX3P78415 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.33■□□□□ 0.36
IRX3P78415 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.33■□□□□ 0.36
IRX3P78415 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
IRX3P78415 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.32■□□□□ 0.36
IRX3P78415 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 AC012508.2-201ENST00000567613 1472 ntBASIC17.32■□□□□ 0.36
IRX3P78415 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
IRX3P78415 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.32■□□□□ 0.36
IRX3P78415 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.32■□□□□ 0.36
IRX3P78415 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
IRX3P78415 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 RN7SKP214-201ENST00000364208 315 ntBASIC17.32■□□□□ 0.36
IRX3P78415 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.32■□□□□ 0.36
IRX3P78415 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.32■□□□□ 0.36
IRX3P78415 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 AL353637.1-201ENST00000451571 732 ntBASIC17.32■□□□□ 0.36
IRX3P78415 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.32■□□□□ 0.36
IRX3P78415 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
IRX3P78415 MIR5572-201ENST00000583188 137 ntBASIC17.32■□□□□ 0.36
IRX3P78415 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.32■□□□□ 0.36
IRX3P78415 AC008805.1-201ENST00000590892 364 ntBASIC17.32■□□□□ 0.36
IRX3P78415 AC020922.3-201ENST00000595064 547 ntBASIC17.32■□□□□ 0.36
IRX3P78415 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.32■□□□□ 0.36
IRX3P78415 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.32■□□□□ 0.36
IRX3P78415 AL353770.1-201ENST00000614915 403 ntBASIC17.32■□□□□ 0.36
IRX3P78415 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
IRX3P78415 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.32■□□□□ 0.36
IRX3P78415 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
IRX3P78415 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.32■□□□□ 0.36
IRX3P78415 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
IRX3P78415 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
IRX3P78415 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 AC105250.1-201ENST00000509378 2057 ntBASIC17.32■□□□□ 0.36
IRX3P78415 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC17.32■□□□□ 0.36
IRX3P78415 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX3P78415 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IRX3P78415 AC007191.1-201ENST00000623179 2995 ntBASIC17.31■□□□□ 0.36
IRX3P78415 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC17.31■□□□□ 0.36
IRX3P78415 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX3P78415 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX3P78415 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.31■□□□□ 0.36
IRX3P78415 AC026748.1-201ENST00000624349 3251 ntBASIC17.31■□□□□ 0.36
IRX3P78415 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX3P78415 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX3P78415 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.31■□□□□ 0.36
IRX3P78415 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
IRX3P78415 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX3P78415 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IRX3P78415 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
IRX3P78415 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX3P78415 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.31■□□□□ 0.36
IRX3P78415 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX3P78415 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.31■□□□□ 0.36
IRX3P78415 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.31■□□□□ 0.36
IRX3P78415 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.31■□□□□ 0.36
IRX3P78415 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IRX3P78415 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.31■□□□□ 0.36
IRX3P78415 LDHBP1-201ENST00000455730 1119 ntBASIC17.31■□□□□ 0.36
IRX3P78415 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IRX3P78415 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.31■□□□□ 0.36
IRX3P78415 RCC2P8-201ENST00000502779 1035 ntBASIC17.31■□□□□ 0.36
IRX3P78415 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX3P78415 AL160314.3-201ENST00000556041 767 ntBASIC17.31■□□□□ 0.36
IRX3P78415 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.31■□□□□ 0.36
IRX3P78415 SNORD3B-2-202ENST00000571722 791 ntBASIC17.31■□□□□ 0.36
IRX3P78415 MIR7845-201ENST00000618396 99 ntBASIC17.31■□□□□ 0.36
IRX3P78415 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.31■□□□□ 0.36
IRX3P78415 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
IRX3P78415 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.31■□□□□ 0.36
IRX3P78415 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
IRX3P78415 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX3P78415 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IRX3P78415 AL513523.2-202ENST00000427283 2040 ntBASIC17.31■□□□□ 0.36
IRX3P78415 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX3P78415 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.31■□□□□ 0.36
IRX3P78415 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
IRX3P78415 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX3P78415 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX3P78415 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
IRX3P78415 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms