Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP54P61011 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP54P61011 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SRP54P61011 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.66□□□□□ -0.06
SRP54P61011 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SRP54P61011 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SRP54P61011 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SRP54P61011 AC010141.1-201ENST00000411585 623 ntBASIC14.66□□□□□ -0.06
SRP54P61011 EIF4HP1-201ENST00000453115 687 ntBASIC14.66□□□□□ -0.06
SRP54P61011 RNMTL1P1-201ENST00000454103 560 ntBASIC14.66□□□□□ -0.06
SRP54P61011 TUBB8P8-201ENST00000458717 1058 ntBASIC14.66□□□□□ -0.06
SRP54P61011 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.66□□□□□ -0.06
SRP54P61011 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SRP54P61011 ACTG1P17-201ENST00000558391 1119 ntBASIC14.66□□□□□ -0.06
SRP54P61011 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.66□□□□□ -0.06
SRP54P61011 DUX4L46-201ENST00000566845 751 ntBASIC14.66□□□□□ -0.06
SRP54P61011 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SRP54P61011 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.66□□□□□ -0.06
SRP54P61011 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SRP54P61011 AC138649.2-201ENST00000615886 705 ntBASIC14.66□□□□□ -0.06
SRP54P61011 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.66□□□□□ -0.06
SRP54P61011 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.66□□□□□ -0.06
SRP54P61011 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SRP54P61011 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SRP54P61011 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SRP54P61011 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
SRP54P61011 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.66□□□□□ -0.06
SRP54P61011 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP54P61011 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.66□□□□□ -0.06
SRP54P61011 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SRP54P61011 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP54P61011 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SRP54P61011 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP54P61011 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.66□□□□□ -0.06
SRP54P61011 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SRP54P61011 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SRP54P61011 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP54P61011 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.66□□□□□ -0.06
SRP54P61011 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.65□□□□□ -0.06
SRP54P61011 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.65□□□□□ -0.06
SRP54P61011 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SRP54P61011 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SRP54P61011 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.65□□□□□ -0.06
SRP54P61011 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.65□□□□□ -0.06
SRP54P61011 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.65□□□□□ -0.06
SRP54P61011 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
SRP54P61011 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.65□□□□□ -0.06
SRP54P61011 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
SRP54P61011 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.65□□□□□ -0.06
SRP54P61011 AC005740.2-201ENST00000511085 419 ntBASIC14.65□□□□□ -0.06
SRP54P61011 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.65□□□□□ -0.06
SRP54P61011 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.65□□□□□ -0.06
SRP54P61011 AC009955.4-201ENST00000597192 544 ntBASIC14.65□□□□□ -0.06
SRP54P61011 AL606495.2-201ENST00000605867 535 ntBASIC14.65□□□□□ -0.06
SRP54P61011 AC022748.3-201ENST00000621828 275 ntBASIC14.65□□□□□ -0.06
SRP54P61011 AL162426.1-201ENST00000624141 743 ntBASIC14.65□□□□□ -0.06
SRP54P61011 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.65□□□□□ -0.06
SRP54P61011 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.65□□□□□ -0.06
SRP54P61011 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.65□□□□□ -0.06
SRP54P61011 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SRP54P61011 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.65□□□□□ -0.06
SRP54P61011 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.65□□□□□ -0.06
SRP54P61011 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.65□□□□□ -0.06
SRP54P61011 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
SRP54P61011 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 E2F3P2-201ENST00000447755 1422 ntBASIC14.65□□□□□ -0.06
SRP54P61011 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.65□□□□□ -0.06
SRP54P61011 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SRP54P61011 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
SRP54P61011 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
SRP54P61011 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.64□□□□□ -0.07
SRP54P61011 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SRP54P61011 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.64□□□□□ -0.07
SRP54P61011 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SRP54P61011 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SRP54P61011 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.64□□□□□ -0.07
SRP54P61011 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SRP54P61011 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.64□□□□□ -0.07
SRP54P61011 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.64□□□□□ -0.07
SRP54P61011 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SRP54P61011 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SRP54P61011 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SRP54P61011 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms