Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.18□□□□□ -0.3
LHX2P50458 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
LHX2P50458 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.18□□□□□ -0.3
LHX2P50458 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 BCYRN1-201ENST00000418539 200 ntBASIC13.18□□□□□ -0.3
LHX2P50458 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.18□□□□□ -0.3
LHX2P50458 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.18□□□□□ -0.3
LHX2P50458 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.18□□□□□ -0.3
LHX2P50458 AC006122.1-201ENST00000493323 440 ntBASIC13.18□□□□□ -0.3
LHX2P50458 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.18□□□□□ -0.3
LHX2P50458 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.18□□□□□ -0.3
LHX2P50458 NDUFV2P1-201ENST00000596415 907 ntBASIC13.18□□□□□ -0.3
LHX2P50458 AC026740.1-201ENST00000607068 791 ntBASIC13.18□□□□□ -0.3
LHX2P50458 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
LHX2P50458 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 AC136759.1-202ENST00000530858 2194 ntBASIC13.18□□□□□ -0.3
LHX2P50458 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.18□□□□□ -0.3
LHX2P50458 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.18□□□□□ -0.3
LHX2P50458 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
LHX2P50458 AC144522.1-201ENST00000625111 1658 ntBASIC13.18□□□□□ -0.3
LHX2P50458 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LHX2P50458 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.17□□□□□ -0.3
LHX2P50458 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.17□□□□□ -0.3
LHX2P50458 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.17□□□□□ -0.3
LHX2P50458 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.17□□□□□ -0.3
LHX2P50458 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.17□□□□□ -0.3
LHX2P50458 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
LHX2P50458 TUBBP5-203ENST00000508529 1334 ntBASIC13.17□□□□□ -0.3
LHX2P50458 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.17□□□□□ -0.3
LHX2P50458 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.17□□□□□ -0.3
LHX2P50458 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.17□□□□□ -0.3
LHX2P50458 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.17□□□□□ -0.3
LHX2P50458 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 TNRC18P2-201ENST00000417666 2714 ntBASIC13.17□□□□□ -0.3
LHX2P50458 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
LHX2P50458 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LHX2P50458 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
LHX2P50458 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.17□□□□□ -0.3
LHX2P50458 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.17□□□□□ -0.3
LHX2P50458 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 AC011742.3-201ENST00000439053 820 ntBASIC13.17□□□□□ -0.3
LHX2P50458 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.17□□□□□ -0.3
LHX2P50458 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.17□□□□□ -0.3
LHX2P50458 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.17□□□□□ -0.3
LHX2P50458 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.17□□□□□ -0.3
LHX2P50458 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.17□□□□□ -0.3
LHX2P50458 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.17□□□□□ -0.3
LHX2P50458 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.17□□□□□ -0.3
LHX2P50458 RBM8B-201ENST00000555532 525 ntBASIC13.17□□□□□ -0.3
LHX2P50458 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.17□□□□□ -0.3
LHX2P50458 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 AL132994.2-201ENST00000603120 687 ntBASIC13.17□□□□□ -0.3
LHX2P50458 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.17□□□□□ -0.3
LHX2P50458 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.17□□□□□ -0.3
LHX2P50458 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.17□□□□□ -0.3
LHX2P50458 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
LHX2P50458 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
LHX2P50458 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
LHX2P50458 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.17□□□□□ -0.3
LHX2P50458 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LHX2P50458 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.16□□□□□ -0.3
LHX2P50458 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.16□□□□□ -0.3
LHX2P50458 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms