Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTTP42858 KRT8P18-201ENST00000413425 1445 ntBASIC16.07■□□□□ 0.16
HTTP42858 AC020931.1-201ENST00000589622 1346 ntBASIC16.07■□□□□ 0.16
HTTP42858 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HTTP42858 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HTTP42858 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HTTP42858 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTTP42858 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTTP42858 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC16.07■□□□□ 0.16
HTTP42858 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTTP42858 KRT18P62-201ENST00000446618 1287 ntBASIC16.07■□□□□ 0.16
HTTP42858 STK24P1-201ENST00000455035 1291 ntBASIC16.07■□□□□ 0.16
HTTP42858 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HTTP42858 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC16.07■□□□□ 0.16
HTTP42858 KRT8P34-201ENST00000577607 1044 ntBASIC16.07■□□□□ 0.16
HTTP42858 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC16.07■□□□□ 0.16
HTTP42858 AC113385.2-201ENST00000614465 762 ntBASIC16.07■□□□□ 0.16
HTTP42858 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HTTP42858 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
HTTP42858 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
HTTP42858 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HTTP42858 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTTP42858 SIGLEC20P-201ENST00000595243 1311 ntBASIC16.07■□□□□ 0.16
HTTP42858 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTTP42858 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
HTTP42858 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTTP42858 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTTP42858 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTTP42858 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTTP42858 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTTP42858 AC073210.1-201ENST00000414799 232 ntBASIC16.06■□□□□ 0.16
HTTP42858 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.06■□□□□ 0.16
HTTP42858 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC16.06■□□□□ 0.16
HTTP42858 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC16.06■□□□□ 0.16
HTTP42858 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTTP42858 AC120498.5-201ENST00000561757 299 ntBASIC16.06■□□□□ 0.16
HTTP42858 AC091304.3-201ENST00000566500 716 ntBASIC16.06■□□□□ 0.16
HTTP42858 NDUFB10P1-201ENST00000567319 521 ntBASIC16.06■□□□□ 0.16
HTTP42858 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTTP42858 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTTP42858 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HTTP42858 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTTP42858 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTTP42858 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.06■□□□□ 0.16
HTTP42858 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTTP42858 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTTP42858 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HTTP42858 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTTP42858 ALG1L15P-201ENST00000482834 794 ntBASIC16.06■□□□□ 0.16
HTTP42858 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.06■□□□□ 0.16
HTTP42858 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC16.06■□□□□ 0.16
HTTP42858 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC16.06■□□□□ 0.16
HTTP42858 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.06■□□□□ 0.16
HTTP42858 AC138627.1-201ENST00000641127 1257 ntBASIC16.06■□□□□ 0.16
HTTP42858 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.06■□□□□ 0.16
HTTP42858 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HTTP42858 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTTP42858 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTTP42858 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTTP42858 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTTP42858 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTTP42858 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.06■□□□□ 0.16
HTTP42858 RPL3P2-204ENST00000413027 1203 ntBASIC16.05■□□□□ 0.16
HTTP42858 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC16.05■□□□□ 0.16
HTTP42858 AC005740.1-201ENST00000515639 522 ntBASIC16.05■□□□□ 0.16
HTTP42858 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC16.05■□□□□ 0.16
HTTP42858 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC16.05■□□□□ 0.16
HTTP42858 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
HTTP42858 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HTTP42858 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.05■□□□□ 0.16
HTTP42858 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.05■□□□□ 0.16
HTTP42858 AC018529.2-202ENST00000611482 3087 ntBASIC16.05■□□□□ 0.16
HTTP42858 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTTP42858 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HTTP42858 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.05■□□□□ 0.16
HTTP42858 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC16.05■□□□□ 0.16
HTTP42858 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC16.05■□□□□ 0.16
HTTP42858 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC16.05■□□□□ 0.16
HTTP42858 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTTP42858 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.05■□□□□ 0.16
HTTP42858 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTTP42858 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTTP42858 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HTTP42858 AC020763.4-201ENST00000623414 4170 ntBASIC16.05■□□□□ 0.16
HTTP42858 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HTTP42858 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTTP42858 CFL1P6-201ENST00000400899 494 ntBASIC16.05■□□□□ 0.16
HTTP42858 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTTP42858 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC16.05■□□□□ 0.16
HTTP42858 AC245369.7-201ENST00000631386 350 ntBASIC16.05■□□□□ 0.16
HTTP42858 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTTP42858 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.05■□□□□ 0.16
HTTP42858 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HTTP42858 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTTP42858 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.04■□□□□ 0.16
HTTP42858 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HTTP42858 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTTP42858 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
HTTP42858 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HTTP42858 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms