Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.99□□□□□ -0.33
GDNFP39905 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
GDNFP39905 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.99□□□□□ -0.33
GDNFP39905 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
GDNFP39905 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.99□□□□□ -0.33
GDNFP39905 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.99□□□□□ -0.33
GDNFP39905 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.99□□□□□ -0.33
GDNFP39905 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 FAM90A12P-201ENST00000519497 2375 ntBASIC12.99□□□□□ -0.33
GDNFP39905 FAM90A24P-201ENST00000520792 2369 ntBASIC12.99□□□□□ -0.33
GDNFP39905 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.99□□□□□ -0.33
GDNFP39905 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
GDNFP39905 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 CR383656.2-201ENST00000548656 2254 ntBASIC12.99□□□□□ -0.33
GDNFP39905 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.99□□□□□ -0.33
GDNFP39905 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.99□□□□□ -0.33
GDNFP39905 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.99□□□□□ -0.33
GDNFP39905 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.99□□□□□ -0.33
GDNFP39905 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.99□□□□□ -0.33
GDNFP39905 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.99□□□□□ -0.33
GDNFP39905 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.99□□□□□ -0.33
GDNFP39905 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
GDNFP39905 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.99□□□□□ -0.33
GDNFP39905 AC067863.1-201ENST00000494933 530 ntBASIC12.99□□□□□ -0.33
GDNFP39905 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.99□□□□□ -0.33
GDNFP39905 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.99□□□□□ -0.33
GDNFP39905 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.99□□□□□ -0.33
GDNFP39905 AC010336.2-201ENST00000564226 506 ntBASIC12.99□□□□□ -0.33
GDNFP39905 AC025048.3-201ENST00000590609 569 ntBASIC12.99□□□□□ -0.33
GDNFP39905 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.99□□□□□ -0.33
GDNFP39905 AC093512.1-201ENST00000617969 520 ntBASIC12.99□□□□□ -0.33
GDNFP39905 AC005702.4-201ENST00000618393 416 ntBASIC12.99□□□□□ -0.33
GDNFP39905 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.99□□□□□ -0.33
GDNFP39905 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
GDNFP39905 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
GDNFP39905 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.99□□□□□ -0.33
GDNFP39905 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.99□□□□□ -0.33
GDNFP39905 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
GDNFP39905 AC020658.7-201ENST00000624274 2442 ntBASIC12.99□□□□□ -0.33
GDNFP39905 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
GDNFP39905 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.99□□□□□ -0.33
GDNFP39905 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
GDNFP39905 AC012617.1-204ENST00000586340 2305 ntBASIC12.99□□□□□ -0.33
GDNFP39905 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.98□□□□□ -0.33
GDNFP39905 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.98□□□□□ -0.33
GDNFP39905 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
GDNFP39905 TCAM1P-207ENST00000485295 1537 ntBASIC12.98□□□□□ -0.33
GDNFP39905 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
GDNFP39905 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
GDNFP39905 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
GDNFP39905 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
GDNFP39905 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 AC018665.1-201ENST00000622927 1362 ntBASIC12.98□□□□□ -0.33
GDNFP39905 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
GDNFP39905 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
GDNFP39905 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
GDNFP39905 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
GDNFP39905 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
GDNFP39905 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GDNFP39905 KRT18P64-201ENST00000434946 1219 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms