Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13□□□□□ -0.33
SFTPBP07988 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SFTPBP07988 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13□□□□□ -0.33
SFTPBP07988 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13□□□□□ -0.33
SFTPBP07988 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SFTPBP07988 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
SFTPBP07988 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
SFTPBP07988 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13□□□□□ -0.33
SFTPBP07988 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13□□□□□ -0.33
SFTPBP07988 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13□□□□□ -0.33
SFTPBP07988 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13□□□□□ -0.33
SFTPBP07988 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13□□□□□ -0.33
SFTPBP07988 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13□□□□□ -0.33
SFTPBP07988 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13□□□□□ -0.33
SFTPBP07988 AL596325.1-201ENST00000563991 1082 ntBASIC13□□□□□ -0.33
SFTPBP07988 TP53TG3HP-202ENST00000569755 579 ntBASIC13□□□□□ -0.33
SFTPBP07988 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13□□□□□ -0.33
SFTPBP07988 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13□□□□□ -0.33
SFTPBP07988 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13□□□□□ -0.33
SFTPBP07988 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13□□□□□ -0.33
SFTPBP07988 AC008494.3-201ENST00000606615 944 ntBASIC13□□□□□ -0.33
SFTPBP07988 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13□□□□□ -0.33
SFTPBP07988 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SFTPBP07988 AC007431.3-201ENST00000623221 587 ntBASIC13□□□□□ -0.33
SFTPBP07988 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13□□□□□ -0.33
SFTPBP07988 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SFTPBP07988 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 AC107918.4-201ENST00000641966 3141 ntBASIC13□□□□□ -0.33
SFTPBP07988 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13□□□□□ -0.33
SFTPBP07988 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SFTPBP07988 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13□□□□□ -0.33
SFTPBP07988 AC018442.1-201ENST00000421439 2061 ntBASIC13□□□□□ -0.33
SFTPBP07988 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
SFTPBP07988 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SFTPBP07988 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SFTPBP07988 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.99□□□□□ -0.33
SFTPBP07988 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 AC027601.5-201ENST00000624065 2482 ntBASIC12.99□□□□□ -0.33
SFTPBP07988 CLK3P2-201ENST00000427566 1453 ntBASIC12.99□□□□□ -0.33
SFTPBP07988 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.99□□□□□ -0.33
SFTPBP07988 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
SFTPBP07988 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.99□□□□□ -0.33
SFTPBP07988 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 LILRP1-201ENST00000444199 1370 ntBASIC12.99□□□□□ -0.33
SFTPBP07988 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.99□□□□□ -0.33
SFTPBP07988 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 AC087499.6-201ENST00000411576 835 ntBASIC12.99□□□□□ -0.33
SFTPBP07988 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.99□□□□□ -0.33
SFTPBP07988 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.99□□□□□ -0.33
SFTPBP07988 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.99□□□□□ -0.33
SFTPBP07988 MEIS3P1-201ENST00000495167 958 ntBASIC12.99□□□□□ -0.33
SFTPBP07988 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.99□□□□□ -0.33
SFTPBP07988 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.99□□□□□ -0.33
SFTPBP07988 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 AC055876.2-201ENST00000531834 546 ntBASIC12.99□□□□□ -0.33
SFTPBP07988 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.99□□□□□ -0.33
SFTPBP07988 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.99□□□□□ -0.33
SFTPBP07988 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 WASH4P-201ENST00000564273 1246 ntBASIC12.99□□□□□ -0.33
SFTPBP07988 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.99□□□□□ -0.33
SFTPBP07988 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.99□□□□□ -0.33
SFTPBP07988 AL391069.4-201ENST00000609583 481 ntBASIC12.99□□□□□ -0.33
SFTPBP07988 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.99□□□□□ -0.33
SFTPBP07988 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.99□□□□□ -0.33
SFTPBP07988 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SFTPBP07988 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms