Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DQA2P01906 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DQA2P01906 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DQA2P01906 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 MEX3B-202ENST00000558133 4333 ntBASIC13.4□□□□□ -0.26
HLA-DQA2P01906 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 AC027601.5-201ENST00000624065 2482 ntBASIC13.4□□□□□ -0.26
HLA-DQA2P01906 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 GRK6P1-201ENST00000400595 1711 ntBASIC13.4□□□□□ -0.26
HLA-DQA2P01906 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 C1QBPP1-201ENST00000400117 770 ntBASIC13.4□□□□□ -0.26
HLA-DQA2P01906 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 AC093004.1-201ENST00000508850 424 ntBASIC13.4□□□□□ -0.26
HLA-DQA2P01906 RRP7BP-205ENST00000566851 833 ntBASIC13.4□□□□□ -0.26
HLA-DQA2P01906 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DQA2P01906 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
HLA-DQA2P01906 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
HLA-DQA2P01906 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
HLA-DQA2P01906 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
HLA-DQA2P01906 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
HLA-DQA2P01906 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.4□□□□□ -0.27
HLA-DQA2P01906 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 MRPS18AP1-201ENST00000414458 589 ntBASIC13.39□□□□□ -0.27
HLA-DQA2P01906 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 INGX-202ENST00000489074 768 ntBASIC13.39□□□□□ -0.27
HLA-DQA2P01906 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 RNA5SP421-201ENST00000516864 134 ntBASIC13.39□□□□□ -0.27
HLA-DQA2P01906 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms