Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 AL133267.1-201ENST00000398220 340 ntBASIC12.61□□□□□ -0.39
HLA-AP01891 AC211486.1-202ENST00000416371 468 ntBASIC12.61□□□□□ -0.39
HLA-AP01891 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
HLA-AP01891 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HLA-AP01891 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-AP01891 AC211476.1-201ENST00000503899 468 ntBASIC12.61□□□□□ -0.39
HLA-AP01891 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.61□□□□□ -0.39
HLA-AP01891 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
HLA-AP01891 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-AP01891 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-AP01891 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HLA-AP01891 AC055717.3-201ENST00000622967 595 ntBASIC12.61□□□□□ -0.39
HLA-AP01891 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-AP01891 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-AP01891 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-AP01891 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-AP01891 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-AP01891 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-AP01891 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-AP01891 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-AP01891 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-AP01891 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-AP01891 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-AP01891 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-AP01891 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-AP01891 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-AP01891 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-AP01891 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HLA-AP01891 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-AP01891 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-AP01891 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-AP01891 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-AP01891 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-AP01891 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
HLA-AP01891 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-AP01891 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
HLA-AP01891 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-AP01891 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 CICP16-201ENST00000502609 2813 ntBASIC12.6□□□□□ -0.39
HLA-AP01891 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 AC111170.3-201ENST00000624282 2464 ntBASIC12.6□□□□□ -0.39
HLA-AP01891 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
HLA-AP01891 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-AP01891 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
HLA-AP01891 MIR1233-2-201ENST00000408138 82 ntBASIC12.6□□□□□ -0.39
HLA-AP01891 MIR1233-1-201ENST00000408722 82 ntBASIC12.6□□□□□ -0.39
HLA-AP01891 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-AP01891 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 AC005237.2-201ENST00000434368 219 ntBASIC12.6□□□□□ -0.39
HLA-AP01891 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-AP01891 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-AP01891 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.6□□□□□ -0.39
HLA-AP01891 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
HLA-AP01891 YBX1P5-201ENST00000509441 847 ntBASIC12.6□□□□□ -0.39
HLA-AP01891 SLED1-202ENST00000512051 380 ntBASIC12.6□□□□□ -0.39
HLA-AP01891 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.6□□□□□ -0.39
HLA-AP01891 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-AP01891 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.6□□□□□ -0.39
HLA-AP01891 AC022145.2-201ENST00000598203 171 ntBASIC12.6□□□□□ -0.39
HLA-AP01891 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
HLA-AP01891 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-AP01891 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-AP01891 AL596442.2-201ENST00000610240 980 ntBASIC12.6□□□□□ -0.39
HLA-AP01891 AC023511.2-201ENST00000618803 211 ntBASIC12.6□□□□□ -0.39
HLA-AP01891 AC105339.1-204ENST00000636249 355 ntBASIC12.6□□□□□ -0.39
HLA-AP01891 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-AP01891 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
HLA-AP01891 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-AP01891 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-AP01891 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-AP01891 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-AP01891 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-AP01891 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-AP01891 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-AP01891 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-AP01891 AC020910.6-201ENST00000623084 1459 ntBASIC12.59□□□□□ -0.39
HLA-AP01891 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-AP01891 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-AP01891 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-AP01891 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HLA-AP01891 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.59□□□□□ -0.39
HLA-AP01891 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-AP01891 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms