Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHOX2O60902 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHOX2O60902 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC14.85□□□□□ -0.03
SHOX2O60902 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SHOX2O60902 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHOX2O60902 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.85□□□□□ -0.03
SHOX2O60902 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHOX2O60902 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHOX2O60902 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHOX2O60902 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.85□□□□□ -0.03
SHOX2O60902 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHOX2O60902 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.85□□□□□ -0.03
SHOX2O60902 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC14.85□□□□□ -0.03
SHOX2O60902 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
SHOX2O60902 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHOX2O60902 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC14.85□□□□□ -0.03
SHOX2O60902 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHOX2O60902 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
SHOX2O60902 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHOX2O60902 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHOX2O60902 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC14.84□□□□□ -0.03
SHOX2O60902 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SHOX2O60902 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC14.84□□□□□ -0.03
SHOX2O60902 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.84□□□□□ -0.03
SHOX2O60902 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SHOX2O60902 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SHOX2O60902 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.84□□□□□ -0.03
SHOX2O60902 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
SHOX2O60902 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
SHOX2O60902 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SHOX2O60902 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC14.84□□□□□ -0.03
SHOX2O60902 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.84□□□□□ -0.03
SHOX2O60902 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SHOX2O60902 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SHOX2O60902 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SHOX2O60902 AL450487.1-201ENST00000426799 995 ntBASIC14.84□□□□□ -0.03
SHOX2O60902 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.84□□□□□ -0.03
SHOX2O60902 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SHOX2O60902 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.84□□□□□ -0.03
SHOX2O60902 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.84□□□□□ -0.03
SHOX2O60902 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.84□□□□□ -0.03
SHOX2O60902 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.84□□□□□ -0.03
SHOX2O60902 AC064836.3-201ENST00000607928 673 ntBASIC14.84□□□□□ -0.03
SHOX2O60902 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.84□□□□□ -0.03
SHOX2O60902 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SHOX2O60902 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.84□□□□□ -0.03
SHOX2O60902 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.84□□□□□ -0.03
SHOX2O60902 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.84□□□□□ -0.03
SHOX2O60902 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.84□□□□□ -0.03
SHOX2O60902 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SHOX2O60902 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC14.84□□□□□ -0.03
SHOX2O60902 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
SHOX2O60902 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHOX2O60902 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHOX2O60902 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHOX2O60902 AC104109.2-201ENST00000602919 1418 ntBASIC14.83□□□□□ -0.03
SHOX2O60902 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SHOX2O60902 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.83□□□□□ -0.03
SHOX2O60902 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHOX2O60902 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHOX2O60902 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHOX2O60902 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SHOX2O60902 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHOX2O60902 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHOX2O60902 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SHOX2O60902 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHOX2O60902 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC14.83□□□□□ -0.04
SHOX2O60902 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.83□□□□□ -0.04
SHOX2O60902 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHOX2O60902 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHOX2O60902 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHOX2O60902 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHOX2O60902 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SHOX2O60902 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHOX2O60902 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms