Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCC4O15439 AL008707.1-201ENST00000422498 534 ntBASIC18.69■□□□□ 0.58
ABCC4O15439 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCC4O15439 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.69■□□□□ 0.58
ABCC4O15439 MSRA-203ENST00000441698 788 ntTSL 2 BASIC18.69■□□□□ 0.58
ABCC4O15439 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.69■□□□□ 0.58
ABCC4O15439 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.69■□□□□ 0.58
ABCC4O15439 NUP210P1-202ENST00000504322 710 ntBASIC18.69■□□□□ 0.58
ABCC4O15439 AC106794.1-201ENST00000506935 792 ntBASIC18.69■□□□□ 0.58
ABCC4O15439 AC134698.3-201ENST00000523880 214 ntBASIC18.69■□□□□ 0.58
ABCC4O15439 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCC4O15439 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC18.69■□□□□ 0.58
ABCC4O15439 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCC4O15439 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ABCC4O15439 CSH2-206ENST00000560142 749 ntTSL 5 BASIC18.69■□□□□ 0.58
ABCC4O15439 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC18.69■□□□□ 0.58
ABCC4O15439 MIR4722-201ENST00000578292 60 ntBASIC18.69■□□□□ 0.58
ABCC4O15439 AL136301.1-201ENST00000615830 422 ntBASIC18.69■□□□□ 0.58
ABCC4O15439 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCC4O15439 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ABCC4O15439 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCC4O15439 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCC4O15439 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
ABCC4O15439 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCC4O15439 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ABCC4O15439 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCC4O15439 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCC4O15439 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCC4O15439 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC18.68■□□□□ 0.58
ABCC4O15439 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCC4O15439 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCC4O15439 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCC4O15439 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ABCC4O15439 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC18.68■□□□□ 0.58
ABCC4O15439 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCC4O15439 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ABCC4O15439 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ABCC4O15439 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC18.68■□□□□ 0.58
ABCC4O15439 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCC4O15439 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
ABCC4O15439 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC18.68■□□□□ 0.58
ABCC4O15439 AC011742.3-201ENST00000439053 820 ntBASIC18.68■□□□□ 0.58
ABCC4O15439 Z97180.1-201ENST00000445173 988 ntBASIC18.68■□□□□ 0.58
ABCC4O15439 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC18.68■□□□□ 0.58
ABCC4O15439 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.68■□□□□ 0.58
ABCC4O15439 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC18.68■□□□□ 0.58
ABCC4O15439 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.68■□□□□ 0.58
ABCC4O15439 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCC4O15439 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC18.68■□□□□ 0.58
ABCC4O15439 AF254983.2-201ENST00000612331 135 ntBASIC18.68■□□□□ 0.58
ABCC4O15439 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.68■□□□□ 0.58
ABCC4O15439 AC004923.1-202ENST00000642106 209 ntBASIC18.68■□□□□ 0.58
ABCC4O15439 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCC4O15439 AC004899.1-201ENST00000424687 1714 ntBASIC18.68■□□□□ 0.58
ABCC4O15439 GOLGA8DP-202ENST00000341390 2184 ntBASIC18.68■□□□□ 0.58
ABCC4O15439 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ABCC4O15439 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ABCC4O15439 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC18.68■□□□□ 0.58
ABCC4O15439 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 E2F3P2-201ENST00000447755 1422 ntBASIC18.67■□□□□ 0.58
ABCC4O15439 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC18.67■□□□□ 0.58
ABCC4O15439 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC18.67■□□□□ 0.58
ABCC4O15439 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ABCC4O15439 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 GSN-209ENST00000449733 2702 ntTSL 2 BASIC18.67■□□□□ 0.58
ABCC4O15439 AL009178.2-201ENST00000597278 2719 ntBASIC18.67■□□□□ 0.58
ABCC4O15439 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC18.67■□□□□ 0.58
ABCC4O15439 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ABCC4O15439 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC18.67■□□□□ 0.58
ABCC4O15439 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ABCC4O15439 ADK-205ENST00000539909 1866 ntTSL 2 BASIC18.67■□□□□ 0.58
ABCC4O15439 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.67■□□□□ 0.58
ABCC4O15439 AC104073.2-201ENST00000453737 312 ntBASIC18.67■□□□□ 0.58
ABCC4O15439 TMEM198B-204ENST00000484016 896 ntBASIC18.67■□□□□ 0.58
ABCC4O15439 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18.67■□□□□ 0.58
ABCC4O15439 MIR3907-201ENST00000579424 151 ntBASIC18.67■□□□□ 0.58
ABCC4O15439 AL133499.1-201ENST00000596207 608 ntBASIC18.67■□□□□ 0.58
ABCC4O15439 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC18.67■□□□□ 0.58
ABCC4O15439 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.67■□□□□ 0.58
ABCC4O15439 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 SNX1-214ENST00000625244 324 ntTSL 5 BASIC18.67■□□□□ 0.58
ABCC4O15439 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ABCC4O15439 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCC4O15439 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC18.67■□□□□ 0.58
ABCC4O15439 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms