Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SOX1O00570 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC15.47■□□□□ 0.07
SOX1O00570 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 MIR611-201ENST00000384869 67 ntBASIC15.47■□□□□ 0.07
SOX1O00570 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC15.47■□□□□ 0.07
SOX1O00570 KRT18P44-201ENST00000416086 1285 ntBASIC15.47■□□□□ 0.07
SOX1O00570 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC15.47■□□□□ 0.07
SOX1O00570 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC15.47■□□□□ 0.07
SOX1O00570 GALP-202ENST00000440823 889 ntTSL 5 BASIC15.47■□□□□ 0.07
SOX1O00570 AC092903.1-201ENST00000466506 262 ntBASIC15.47■□□□□ 0.07
SOX1O00570 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC15.47■□□□□ 0.07
SOX1O00570 RN7SL672P-201ENST00000474091 317 ntBASIC15.47■□□□□ 0.07
SOX1O00570 AC025186.1-201ENST00000478174 870 ntBASIC15.47■□□□□ 0.07
SOX1O00570 RN7SL375P-201ENST00000492442 298 ntBASIC15.47■□□□□ 0.07
SOX1O00570 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC15.47■□□□□ 0.07
SOX1O00570 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SOX1O00570 KRT8P2-201ENST00000556193 944 ntBASIC15.47■□□□□ 0.07
SOX1O00570 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC15.47■□□□□ 0.07
SOX1O00570 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC15.47■□□□□ 0.07
SOX1O00570 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SOX1O00570 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 AC005274.1-201ENST00000623460 802 ntBASIC15.47■□□□□ 0.07
SOX1O00570 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC15.47■□□□□ 0.07
SOX1O00570 MIEF1-215ENST00000637854 213 ntBASIC15.47■□□□□ 0.07
SOX1O00570 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
SOX1O00570 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC15.47■□□□□ 0.07
SOX1O00570 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
SOX1O00570 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.47■□□□□ 0.07
SOX1O00570 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.46■□□□□ 0.07
SOX1O00570 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SOX1O00570 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SOX1O00570 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SOX1O00570 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SOX1O00570 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SOX1O00570 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SOX1O00570 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SOX1O00570 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SOX1O00570 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SOX1O00570 AC124067.4-201ENST00000519691 2379 ntBASIC15.46■□□□□ 0.07
SOX1O00570 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SOX1O00570 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SOX1O00570 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
SOX1O00570 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
SOX1O00570 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SOX1O00570 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC15.46■□□□□ 0.07
SOX1O00570 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SOX1O00570 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC15.46■□□□□ 0.07
SOX1O00570 AL954722.1-201ENST00000431238 259 ntBASIC15.46■□□□□ 0.07
SOX1O00570 RN7SL128P-201ENST00000467883 305 ntBASIC15.46■□□□□ 0.07
SOX1O00570 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC15.46■□□□□ 0.07
SOX1O00570 AC087203.1-201ENST00000532111 1181 ntBASIC15.46■□□□□ 0.07
SOX1O00570 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.46■□□□□ 0.07
SOX1O00570 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC15.46■□□□□ 0.07
SOX1O00570 GAS7-216ENST00000583882 553 ntTSL 5 BASIC15.46■□□□□ 0.07
SOX1O00570 AC016582.2-202ENST00000587765 1094 ntBASIC15.46■□□□□ 0.07
SOX1O00570 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC15.46■□□□□ 0.07
SOX1O00570 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC15.46■□□□□ 0.07
SOX1O00570 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC15.46■□□□□ 0.07
SOX1O00570 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.46■□□□□ 0.07
SOX1O00570 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SOX1O00570 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SOX1O00570 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC15.46■□□□□ 0.07
SOX1O00570 MSANTD2P1-201ENST00000445341 1368 ntBASIC15.46■□□□□ 0.07
SOX1O00570 AL513523.2-202ENST00000427283 2040 ntBASIC15.46■□□□□ 0.07
SOX1O00570 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SOX1O00570 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SOX1O00570 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SOX1O00570 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SOX1O00570 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
SOX1O00570 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SOX1O00570 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.45■□□□□ 0.06
SOX1O00570 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SOX1O00570 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
SOX1O00570 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SOX1O00570 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
SOX1O00570 SNRPD2P2-201ENST00000473818 333 ntBASIC15.45■□□□□ 0.06
SOX1O00570 GCOM2-201ENST00000509133 1104 ntBASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms