Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 PCDHA3-202ENST00000532566 4594 ntBASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 BCYRN1-201ENST00000418539 200 ntBASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HMG20BQ9P0W2 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 RPL18P13-201ENST00000478088 569 ntBASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 AC027601.3-201ENST00000622907 509 ntBASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 AC068587.8-201ENST00000641239 219 ntBASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 Z98259.2-201ENST00000641583 609 ntBASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 AC004923.1-202ENST00000642106 209 ntBASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.98■□□□□ 0.47
HMG20BQ9P0W2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.97■□□□□ 0.47
HMG20BQ9P0W2 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms