Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHD8Q9HCK8 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHD8Q9HCK8 AC023090.2-201ENST00000625182 2110 ntBASIC13.4□□□□□ -0.26
CHD8Q9HCK8 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 OR7E12P-201ENST00000344740 973 ntBASIC13.4□□□□□ -0.26
CHD8Q9HCK8 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 TYMSP2-201ENST00000589501 424 ntBASIC13.4□□□□□ -0.26
CHD8Q9HCK8 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 GUCY2EP-203ENST00000531117 1918 ntBASIC13.4□□□□□ -0.26
CHD8Q9HCK8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 TPT1P9-201ENST00000413759 514 ntBASIC13.4□□□□□ -0.26
CHD8Q9HCK8 RBM14-205ENST00000443702 732 ntTSL 3 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 RN7SL375P-201ENST00000492442 298 ntBASIC13.4□□□□□ -0.26
CHD8Q9HCK8 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 PRR20FP-201ENST00000603320 180 ntBASIC13.4□□□□□ -0.26
CHD8Q9HCK8 PDLIM1P1-201ENST00000604187 969 ntBASIC13.4□□□□□ -0.26
CHD8Q9HCK8 AC113385.2-201ENST00000614465 762 ntBASIC13.4□□□□□ -0.26
CHD8Q9HCK8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.4□□□□□ -0.26
CHD8Q9HCK8 AL590440.2-201ENST00000641973 1595 ntBASIC13.4□□□□□ -0.26
CHD8Q9HCK8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CHD8Q9HCK8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.4□□□□□ -0.27
CHD8Q9HCK8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CHD8Q9HCK8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CHD8Q9HCK8 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC13.4□□□□□ -0.27
CHD8Q9HCK8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CHD8Q9HCK8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 OR7E115P-201ENST00000382617 1024 ntBASIC13.39□□□□□ -0.27
CHD8Q9HCK8 MIR181D-201ENST00000384853 137 ntBASIC13.39□□□□□ -0.27
CHD8Q9HCK8 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 HNRNPA1P10-201ENST00000444945 962 ntBASIC13.39□□□□□ -0.27
CHD8Q9HCK8 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 AC138627.1-201ENST00000641127 1257 ntBASIC13.39□□□□□ -0.27
CHD8Q9HCK8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.39□□□□□ -0.27
CHD8Q9HCK8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 CRIP1P2-201ENST00000425396 228 ntBASIC13.39□□□□□ -0.27
CHD8Q9HCK8 AL450346.2-201ENST00000495602 1024 ntBASIC13.39□□□□□ -0.27
CHD8Q9HCK8 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms