Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 RPL35P9-201ENST00000446059 350 ntBASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 AC010234.1-201ENST00000494599 870 ntBASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 AC026410.1-201ENST00000507366 1101 ntBASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 OR5BD1P-201ENST00000532527 817 ntBASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 AL022344.2-201ENST00000568976 968 ntBASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 SIGLEC22P-201ENST00000599104 714 ntBASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 AC138466.4-201ENST00000623965 852 ntBASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 AC011270.2-201ENST00000624293 2550 ntBASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CRAMP1Q96RY5 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 RN7SKP109-201ENST00000410592 316 ntBASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 GCSHP3-201ENST00000431120 391 ntBASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 MIR4472-1-201ENST00000584349 80 ntBASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 AC006158.1-201ENST00000610661 249 ntBASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CRAMP1Q96RY5 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 PSMD4P1-201ENST00000433951 1109 ntBASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 RN7SL357P-201ENST00000581065 298 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms