Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 AL138725.1-201ENST00000407347 1314 ntBASIC13.04□□□□□ -0.32
CPEB3Q8NE35 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 AC020910.5-201ENST00000623668 1865 ntBASIC13.04□□□□□ -0.32
CPEB3Q8NE35 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 RN7SKP230-201ENST00000365642 335 ntBASIC13.03□□□□□ -0.32
CPEB3Q8NE35 GK-202ENST00000378941 458 ntTSL 3 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 AC112492.5-201ENST00000421897 457 ntBASIC13.03□□□□□ -0.32
CPEB3Q8NE35 TLE1P1-201ENST00000422965 589 ntBASIC13.03□□□□□ -0.32
CPEB3Q8NE35 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 FTLP10-202ENST00000505798 471 ntBASIC13.03□□□□□ -0.32
CPEB3Q8NE35 AL391280.1-201ENST00000506969 1062 ntBASIC13.03□□□□□ -0.32
CPEB3Q8NE35 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 AC078819.1-201ENST00000547454 765 ntBASIC13.03□□□□□ -0.32
CPEB3Q8NE35 AC012085.1-201ENST00000548270 765 ntBASIC13.03□□□□□ -0.32
CPEB3Q8NE35 KRT90P-201ENST00000549264 1064 ntBASIC13.03□□□□□ -0.32
CPEB3Q8NE35 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 AC138696.2-201ENST00000607376 223 ntBASIC13.03□□□□□ -0.32
CPEB3Q8NE35 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 FKBP4P6-201ENST00000457486 1332 ntBASIC13.03□□□□□ -0.32
CPEB3Q8NE35 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 PDIA3P1-201ENST00000471856 1510 ntBASIC13.03□□□□□ -0.32
CPEB3Q8NE35 AC011840.2-201ENST00000563063 1520 ntBASIC13.03□□□□□ -0.32
CPEB3Q8NE35 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPEB3Q8NE35 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CPEB3Q8NE35 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.02□□□□□ -0.32
CPEB3Q8NE35 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
CPEB3Q8NE35 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CPEB3Q8NE35 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CPEB3Q8NE35 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CPEB3Q8NE35 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CPEB3Q8NE35 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.02□□□□□ -0.32
CPEB3Q8NE35 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.02□□□□□ -0.32
CPEB3Q8NE35 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CPEB3Q8NE35 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CPEB3Q8NE35 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CPEB3Q8NE35 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CPEB3Q8NE35 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
CPEB3Q8NE35 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CPEB3Q8NE35 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CPEB3Q8NE35 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CPEB3Q8NE35 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
CPEB3Q8NE35 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.02□□□□□ -0.33
CPEB3Q8NE35 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CPEB3Q8NE35 AC079776.1-201ENST00000401540 1152 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms