Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 AC215219.1-201ENST00000400706 1817 ntBASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.08□□□□□ -0.31
ZIC4Q8N9L1 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
ZIC4Q8N9L1 KRT8P28-201ENST00000433288 1390 ntBASIC13.08□□□□□ -0.31
ZIC4Q8N9L1 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
ZIC4Q8N9L1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ZIC4Q8N9L1 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 BX640514.1-201ENST00000583223 1918 ntBASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 AL035414.1-201ENST00000451327 857 ntBASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 FAM86HP-204ENST00000513466 959 ntBASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 AC139749.1-202ENST00000617529 3139 ntBASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.08□□□□□ -0.32
ZIC4Q8N9L1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 AL354877.1-201ENST00000424412 413 ntBASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 HSPB1P2-201ENST00000448722 546 ntBASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 Z93015.1-201ENST00000451718 390 ntBASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
ZIC4Q8N9L1 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms