Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 AC007191.1-201ENST00000623179 2995 ntBASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 AC006001.1-201ENST00000325130 474 ntBASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 AP006547.1-201ENST00000563435 692 ntBASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 AC106886.1-201ENST00000568660 600 ntBASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 AC006453.4-201ENST00000636949 1252 ntBASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 COX5BP1-201ENST00000507622 393 ntBASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 AP000812.2-201ENST00000538934 718 ntBASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 RHOXF1P1-202ENST00000635473 501 ntBASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB11FIP4Q86YS3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms