Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 NT5C-204ENST00000578337 582 ntTSL 2 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC18.21■□□□□ 0.51
COL23A1Q86Y22 AC233280.19-201ENST00000633223 136 ntBASIC18.21■□□□□ 0.51
COL23A1Q86Y22 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
COL23A1Q86Y22 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
COL23A1Q86Y22 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 AC023906.1-201ENST00000486386 453 ntBASIC18.2■□□□□ 0.5
COL23A1Q86Y22 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 GAS7-216ENST00000583882 553 ntTSL 5 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 AL160191.2-201ENST00000603975 601 ntBASIC18.2■□□□□ 0.5
COL23A1Q86Y22 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 AC092135.3-201ENST00000624151 1846 ntBASIC18.2■□□□□ 0.5
COL23A1Q86Y22 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL23A1Q86Y22 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 MSANTD2P1-201ENST00000445341 1368 ntBASIC18.19■□□□□ 0.5
COL23A1Q86Y22 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 RPL3P5-201ENST00000441645 1232 ntBASIC18.19■□□□□ 0.5
COL23A1Q86Y22 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 AC067931.2-201ENST00000623655 2003 ntBASIC18.19■□□□□ 0.5
COL23A1Q86Y22 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 AP000769.1-203ENST00000637245 208 ntBASIC18.19■□□□□ 0.5
COL23A1Q86Y22 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 CYP2T1P-202ENST00000641596 2535 ntBASIC18.19■□□□□ 0.5
COL23A1Q86Y22 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms