Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.61□□□□□ -0.39
COL10A1Q03692 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
COL10A1Q03692 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
COL10A1Q03692 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.6□□□□□ -0.39
COL10A1Q03692 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
COL10A1Q03692 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
COL10A1Q03692 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
COL10A1Q03692 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
COL10A1Q03692 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.6□□□□□ -0.39
COL10A1Q03692 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
COL10A1Q03692 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.6□□□□□ -0.39
COL10A1Q03692 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.6□□□□□ -0.39
COL10A1Q03692 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.6□□□□□ -0.39
COL10A1Q03692 BAATP1-201ENST00000412284 1225 ntBASIC12.6□□□□□ -0.39
COL10A1Q03692 ACTG1P3-201ENST00000431775 1114 ntBASIC12.6□□□□□ -0.39
COL10A1Q03692 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.6□□□□□ -0.39
COL10A1Q03692 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.6□□□□□ -0.39
COL10A1Q03692 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 AC022494.1-201ENST00000466044 728 ntBASIC12.6□□□□□ -0.39
COL10A1Q03692 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.6□□□□□ -0.39
COL10A1Q03692 AC011495.1-201ENST00000498085 584 ntBASIC12.6□□□□□ -0.39
COL10A1Q03692 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.6□□□□□ -0.39
COL10A1Q03692 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
COL10A1Q03692 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.6□□□□□ -0.39
COL10A1Q03692 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.6□□□□□ -0.39
COL10A1Q03692 MIR5189-201ENST00000577370 114 ntBASIC12.6□□□□□ -0.39
COL10A1Q03692 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.6□□□□□ -0.39
COL10A1Q03692 AL008721.1-201ENST00000609964 604 ntBASIC12.6□□□□□ -0.39
COL10A1Q03692 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
COL10A1Q03692 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.6□□□□□ -0.39
COL10A1Q03692 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.6□□□□□ -0.39
COL10A1Q03692 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.6□□□□□ -0.39
COL10A1Q03692 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
COL10A1Q03692 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
COL10A1Q03692 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.6□□□□□ -0.39
COL10A1Q03692 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL10A1Q03692 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL10A1Q03692 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL10A1Q03692 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL10A1Q03692 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.59□□□□□ -0.39
COL10A1Q03692 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL10A1Q03692 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
COL10A1Q03692 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
COL10A1Q03692 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.59□□□□□ -0.39
COL10A1Q03692 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL10A1Q03692 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL10A1Q03692 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.59□□□□□ -0.39
COL10A1Q03692 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.59□□□□□ -0.39
COL10A1Q03692 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL10A1Q03692 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL10A1Q03692 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL10A1Q03692 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL10A1Q03692 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.59□□□□□ -0.39
COL10A1Q03692 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.59□□□□□ -0.39
COL10A1Q03692 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
COL10A1Q03692 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.59□□□□□ -0.39
COL10A1Q03692 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL10A1Q03692 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL10A1Q03692 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.59□□□□□ -0.39
COL10A1Q03692 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
COL10A1Q03692 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL10A1Q03692 AC012441.1-201ENST00000446669 685 ntBASIC12.59□□□□□ -0.39
COL10A1Q03692 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.59□□□□□ -0.39
COL10A1Q03692 RN7SL692P-201ENST00000464677 288 ntBASIC12.59□□□□□ -0.39
COL10A1Q03692 AC068587.3-201ENST00000526613 355 ntBASIC12.59□□□□□ -0.39
COL10A1Q03692 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
COL10A1Q03692 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.59□□□□□ -0.39
COL10A1Q03692 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.59□□□□□ -0.39
COL10A1Q03692 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.59□□□□□ -0.39
COL10A1Q03692 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.59□□□□□ -0.39
COL10A1Q03692 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL10A1Q03692 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.59□□□□□ -0.39
COL10A1Q03692 AL359881.2-201ENST00000602973 570 ntBASIC12.59□□□□□ -0.39
COL10A1Q03692 MIR6752-201ENST00000618442 71 ntBASIC12.59□□□□□ -0.39
COL10A1Q03692 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
COL10A1Q03692 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms