Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX6-1P78426 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.19□□□□□ -0.3
NKX6-1P78426 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX6-1P78426 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NKX6-1P78426 AL158070.2-201ENST00000623713 1621 ntBASIC13.19□□□□□ -0.3
NKX6-1P78426 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX6-1P78426 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX6-1P78426 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX6-1P78426 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NKX6-1P78426 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NKX6-1P78426 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NKX6-1P78426 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX6-1P78426 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX6-1P78426 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX6-1P78426 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 AC136621.1-201ENST00000624017 2304 ntBASIC13.18□□□□□ -0.3
NKX6-1P78426 KRT8P35-201ENST00000483942 1338 ntBASIC13.18□□□□□ -0.3
NKX6-1P78426 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX6-1P78426 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX6-1P78426 AC112693.3-201ENST00000624819 1983 ntBASIC13.18□□□□□ -0.3
NKX6-1P78426 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NKX6-1P78426 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.18□□□□□ -0.3
NKX6-1P78426 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NKX6-1P78426 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NKX6-1P78426 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX6-1P78426 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX6-1P78426 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX6-1P78426 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX6-1P78426 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NKX6-1P78426 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.18□□□□□ -0.3
NKX6-1P78426 ACTBP8-201ENST00000403258 1108 ntBASIC13.18□□□□□ -0.3
NKX6-1P78426 AL139094.1-201ENST00000405549 1188 ntBASIC13.18□□□□□ -0.3
NKX6-1P78426 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.18□□□□□ -0.3
NKX6-1P78426 FAM197Y7-201ENST00000432892 766 ntBASIC13.18□□□□□ -0.3
NKX6-1P78426 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.18□□□□□ -0.3
NKX6-1P78426 MTX1P1-201ENST00000440904 838 ntBASIC13.18□□□□□ -0.3
NKX6-1P78426 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.18□□□□□ -0.3
NKX6-1P78426 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
NKX6-1P78426 AC078819.1-201ENST00000547454 765 ntBASIC13.18□□□□□ -0.3
NKX6-1P78426 AC012085.1-201ENST00000548270 765 ntBASIC13.18□□□□□ -0.3
NKX6-1P78426 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.18□□□□□ -0.3
NKX6-1P78426 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.18□□□□□ -0.3
NKX6-1P78426 AC104982.3-201ENST00000581995 514 ntBASIC13.18□□□□□ -0.3
NKX6-1P78426 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX6-1P78426 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.18□□□□□ -0.3
NKX6-1P78426 MIR6727-201ENST00000620702 65 ntBASIC13.18□□□□□ -0.3
NKX6-1P78426 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.18□□□□□ -0.3
NKX6-1P78426 AC015967.2-201ENST00000624092 234 ntBASIC13.18□□□□□ -0.3
NKX6-1P78426 AC006435.4-201ENST00000625037 234 ntBASIC13.18□□□□□ -0.3
NKX6-1P78426 AL356737.1-201ENST00000634391 234 ntBASIC13.18□□□□□ -0.3
NKX6-1P78426 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX6-1P78426 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX6-1P78426 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX6-1P78426 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX6-1P78426 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
NKX6-1P78426 CICP11-201ENST00000434745 2827 ntBASIC13.18□□□□□ -0.3
NKX6-1P78426 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
NKX6-1P78426 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX6-1P78426 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX6-1P78426 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NKX6-1P78426 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.18□□□□□ -0.3
NKX6-1P78426 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-1P78426 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NKX6-1P78426 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-1P78426 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX6-1P78426 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms