Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.98□□□□□ -0.33
CLDN12P56749 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.98□□□□□ -0.33
CLDN12P56749 PGAM5P1-201ENST00000518923 814 ntBASIC12.98□□□□□ -0.33
CLDN12P56749 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.98□□□□□ -0.33
CLDN12P56749 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.98□□□□□ -0.33
CLDN12P56749 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.98□□□□□ -0.33
CLDN12P56749 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.98□□□□□ -0.33
CLDN12P56749 AC000095.1-201ENST00000603208 874 ntBASIC12.98□□□□□ -0.33
CLDN12P56749 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.98□□□□□ -0.33
CLDN12P56749 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.98□□□□□ -0.33
CLDN12P56749 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
CLDN12P56749 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 AC023794.5-201ENST00000564380 2157 ntBASIC12.98□□□□□ -0.33
CLDN12P56749 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.98□□□□□ -0.33
CLDN12P56749 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.98□□□□□ -0.33
CLDN12P56749 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CLDN12P56749 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.98□□□□□ -0.33
CLDN12P56749 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.98□□□□□ -0.33
CLDN12P56749 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN12P56749 AC020910.6-201ENST00000623084 1459 ntBASIC12.97□□□□□ -0.33
CLDN12P56749 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN12P56749 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN12P56749 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN12P56749 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN12P56749 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.97□□□□□ -0.33
CLDN12P56749 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
CLDN12P56749 AL356585.2-201ENST00000625078 2396 ntBASIC12.97□□□□□ -0.33
CLDN12P56749 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CLDN12P56749 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
CLDN12P56749 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.97□□□□□ -0.33
CLDN12P56749 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.97□□□□□ -0.33
CLDN12P56749 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN12P56749 FDX1P1-201ENST00000449115 551 ntBASIC12.97□□□□□ -0.33
CLDN12P56749 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN12P56749 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.97□□□□□ -0.33
CLDN12P56749 POLD2P1-201ENST00000511220 997 ntBASIC12.97□□□□□ -0.33
CLDN12P56749 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN12P56749 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.97□□□□□ -0.33
CLDN12P56749 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CLDN12P56749 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
CLDN12P56749 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
CLDN12P56749 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN12P56749 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CLDN12P56749 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CLDN12P56749 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN12P56749 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CLDN12P56749 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN12P56749 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
CLDN12P56749 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDN12P56749 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN12P56749 AL365181.3-201ENST00000605886 3222 ntBASIC12.96□□□□□ -0.33
CLDN12P56749 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.96□□□□□ -0.33
CLDN12P56749 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN12P56749 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN12P56749 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN12P56749 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN12P56749 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CLDN12P56749 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN12P56749 AL158070.2-201ENST00000623713 1621 ntBASIC12.96□□□□□ -0.33
CLDN12P56749 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CLDN12P56749 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDN12P56749 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms