Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB28P51157 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 AC139712.1-201ENST00000378256 1875 ntBASIC14.31□□□□□ -0.12
RAB28P51157 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
RAB28P51157 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB28P51157 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
RAB28P51157 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB28P51157 REXO1L6P-201ENST00000603433 1515 ntBASIC14.31□□□□□ -0.12
RAB28P51157 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 INTS4P1-203ENST00000641008 3683 ntBASIC14.3□□□□□ -0.12
RAB28P51157 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB28P51157 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB28P51157 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB28P51157 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB28P51157 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.3□□□□□ -0.12
RAB28P51157 MIR1908-201ENST00000410394 80 ntBASIC14.3□□□□□ -0.12
RAB28P51157 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB28P51157 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB28P51157 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB28P51157 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 CICP12-201ENST00000455801 843 ntBASIC14.3□□□□□ -0.12
RAB28P51157 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.3□□□□□ -0.12
RAB28P51157 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB28P51157 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.3□□□□□ -0.12
RAB28P51157 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.3□□□□□ -0.12
RAB28P51157 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RAB28P51157 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB28P51157 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 AC103988.2-201ENST00000561804 725 ntBASIC14.3□□□□□ -0.12
RAB28P51157 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB28P51157 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RAB28P51157 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB28P51157 AC132192.2-201ENST00000596206 1147 ntBASIC14.3□□□□□ -0.12
RAB28P51157 AC009955.4-201ENST00000597192 544 ntBASIC14.3□□□□□ -0.12
RAB28P51157 AC091271.1-201ENST00000611877 1162 ntBASIC14.3□□□□□ -0.12
RAB28P51157 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB28P51157 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.3□□□□□ -0.12
RAB28P51157 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB28P51157 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB28P51157 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RAB28P51157 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
RAB28P51157 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB28P51157 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RAB28P51157 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB28P51157 AC015688.4-201ENST00000580780 1647 ntBASIC14.3□□□□□ -0.12
RAB28P51157 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
RAB28P51157 AC106881.1-201ENST00000605849 3329 ntBASIC14.3□□□□□ -0.12
RAB28P51157 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB28P51157 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB28P51157 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAB28P51157 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB28P51157 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB28P51157 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAB28P51157 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB28P51157 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB28P51157 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB28P51157 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB28P51157 OR2I1P-210ENST00000642037 4691 ntBASIC14.29□□□□□ -0.12
RAB28P51157 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB28P51157 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
RAB28P51157 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB28P51157 AC113367.3-201ENST00000508316 1912 ntBASIC14.29□□□□□ -0.12
RAB28P51157 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB28P51157 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB28P51157 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAB28P51157 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB28P51157 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB28P51157 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB28P51157 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB28P51157 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB28P51157 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB28P51157 AL513477.1-201ENST00000602865 2407 ntBASIC14.29□□□□□ -0.12
RAB28P51157 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB28P51157 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB28P51157 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.29□□□□□ -0.12
RAB28P51157 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB28P51157 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms