Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC6A12P48065 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC6A12P48065 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC6A12P48065 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SLC6A12P48065 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SLC6A12P48065 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC6A12P48065 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.27□□□□□ -0.12
SLC6A12P48065 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC6A12P48065 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC6A12P48065 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC6A12P48065 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SLC6A12P48065 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.27□□□□□ -0.12
SLC6A12P48065 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SLC6A12P48065 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC6A12P48065 AC117489.1-201ENST00000625169 3217 ntBASIC14.27□□□□□ -0.12
SLC6A12P48065 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SLC6A12P48065 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.27□□□□□ -0.12
SLC6A12P48065 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC6A12P48065 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.27□□□□□ -0.12
SLC6A12P48065 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SLC6A12P48065 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC6A12P48065 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SLC6A12P48065 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC6A12P48065 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SLC6A12P48065 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
SLC6A12P48065 AHCYP2-201ENST00000430630 1300 ntBASIC14.27□□□□□ -0.12
SLC6A12P48065 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.27□□□□□ -0.12
SLC6A12P48065 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SLC6A12P48065 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.27□□□□□ -0.13
SLC6A12P48065 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.27□□□□□ -0.13
SLC6A12P48065 AC010141.1-201ENST00000411585 623 ntBASIC14.27□□□□□ -0.13
SLC6A12P48065 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.27□□□□□ -0.13
SLC6A12P48065 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.27□□□□□ -0.13
SLC6A12P48065 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.27□□□□□ -0.13
SLC6A12P48065 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.27□□□□□ -0.13
SLC6A12P48065 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.27□□□□□ -0.13
SLC6A12P48065 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.27□□□□□ -0.13
SLC6A12P48065 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.27□□□□□ -0.13
SLC6A12P48065 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.27□□□□□ -0.13
SLC6A12P48065 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.27□□□□□ -0.13
SLC6A12P48065 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.27□□□□□ -0.13
SLC6A12P48065 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.27□□□□□ -0.13
SLC6A12P48065 MYO15B-237ENST00000642007 4893 ntBASIC14.27□□□□□ -0.13
SLC6A12P48065 AL928921.2-201ENST00000641325 2442 ntBASIC14.27□□□□□ -0.13
SLC6A12P48065 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
SLC6A12P48065 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.27□□□□□ -0.13
SLC6A12P48065 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.27□□□□□ -0.13
SLC6A12P48065 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SLC6A12P48065 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC6A12P48065 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.27□□□□□ -0.13
SLC6A12P48065 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SLC6A12P48065 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC6A12P48065 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SLC6A12P48065 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.26□□□□□ -0.13
SLC6A12P48065 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC6A12P48065 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC6A12P48065 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC6A12P48065 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC6A12P48065 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC6A12P48065 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.26□□□□□ -0.13
SLC6A12P48065 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC6A12P48065 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SLC6A12P48065 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC6A12P48065 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC6A12P48065 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC6A12P48065 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SLC6A12P48065 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SLC6A12P48065 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC6A12P48065 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.26□□□□□ -0.13
SLC6A12P48065 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC6A12P48065 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.26□□□□□ -0.13
SLC6A12P48065 CNN2P10-201ENST00000443067 918 ntBASIC14.26□□□□□ -0.13
SLC6A12P48065 CICP12-201ENST00000455801 843 ntBASIC14.26□□□□□ -0.13
SLC6A12P48065 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SLC6A12P48065 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.26□□□□□ -0.13
SLC6A12P48065 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SLC6A12P48065 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC6A12P48065 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.26□□□□□ -0.13
SLC6A12P48065 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms