Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL15A1P39059 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC18.54■□□□□ 0.56
COL15A1P39059 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL15A1P39059 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL15A1P39059 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL15A1P39059 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL15A1P39059 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC18.54■□□□□ 0.56
COL15A1P39059 RHEB-207ENST00000496004 744 ntTSL 2 BASIC18.54■□□□□ 0.56
COL15A1P39059 PTK2-225ENST00000520892 571 ntTSL 4 BASIC18.54■□□□□ 0.56
COL15A1P39059 IGHVIII-5-2-201ENST00000522505 261 ntBASIC18.54■□□□□ 0.56
COL15A1P39059 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC18.54■□□□□ 0.56
COL15A1P39059 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC18.54■□□□□ 0.56
COL15A1P39059 AC105137.3-201ENST00000617588 984 ntBASIC18.54■□□□□ 0.56
COL15A1P39059 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL15A1P39059 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.54■□□□□ 0.56
COL15A1P39059 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL15A1P39059 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL15A1P39059 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL15A1P39059 AC009093.10-201ENST00000641956 1442 ntBASIC18.53■□□□□ 0.56
COL15A1P39059 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL15A1P39059 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL15A1P39059 MARK2P16-201ENST00000605714 1723 ntBASIC18.53■□□□□ 0.56
COL15A1P39059 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL15A1P39059 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL15A1P39059 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL15A1P39059 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL15A1P39059 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
COL15A1P39059 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL15A1P39059 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC18.53■□□□□ 0.56
COL15A1P39059 AL136172.1-201ENST00000598590 1394 ntBASIC18.53■□□□□ 0.56
COL15A1P39059 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.53■□□□□ 0.56
COL15A1P39059 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL15A1P39059 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC18.53■□□□□ 0.56
COL15A1P39059 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.53■□□□□ 0.56
COL15A1P39059 AC092135.3-201ENST00000624151 1846 ntBASIC18.53■□□□□ 0.56
COL15A1P39059 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC18.53■□□□□ 0.56
COL15A1P39059 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL15A1P39059 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL15A1P39059 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC18.53■□□□□ 0.56
COL15A1P39059 DUX4L50-201ENST00000455245 715 ntBASIC18.53■□□□□ 0.56
COL15A1P39059 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC18.53■□□□□ 0.56
COL15A1P39059 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC18.53■□□□□ 0.56
COL15A1P39059 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
COL15A1P39059 AC127024.7-201ENST00000625101 200 ntBASIC18.53■□□□□ 0.56
COL15A1P39059 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
COL15A1P39059 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.53■□□□□ 0.56
COL15A1P39059 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.53■□□□□ 0.56
COL15A1P39059 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL15A1P39059 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL15A1P39059 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL15A1P39059 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
COL15A1P39059 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL15A1P39059 AC018442.1-201ENST00000421439 2061 ntBASIC18.52■□□□□ 0.56
COL15A1P39059 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.52■□□□□ 0.56
COL15A1P39059 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL15A1P39059 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL15A1P39059 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC18.52■□□□□ 0.56
COL15A1P39059 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
COL15A1P39059 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC18.52■□□□□ 0.56
COL15A1P39059 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL15A1P39059 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL15A1P39059 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL15A1P39059 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.52■□□□□ 0.56
COL15A1P39059 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL15A1P39059 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC18.52■□□□□ 0.56
COL15A1P39059 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL15A1P39059 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
COL15A1P39059 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL15A1P39059 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC18.52■□□□□ 0.55
COL15A1P39059 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL15A1P39059 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
COL15A1P39059 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC18.52■□□□□ 0.55
COL15A1P39059 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
COL15A1P39059 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
COL15A1P39059 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
COL15A1P39059 NUDT4P2-201ENST00000578341 546 ntBASIC18.52■□□□□ 0.55
COL15A1P39059 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
COL15A1P39059 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL15A1P39059 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL15A1P39059 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL15A1P39059 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL15A1P39059 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
COL15A1P39059 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL15A1P39059 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
COL15A1P39059 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL15A1P39059 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
COL15A1P39059 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC18.51■□□□□ 0.55
COL15A1P39059 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL15A1P39059 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL15A1P39059 DBET-201ENST00000630918 3363 ntBASIC18.51■□□□□ 0.55
COL15A1P39059 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
COL15A1P39059 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL15A1P39059 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL15A1P39059 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL15A1P39059 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL15A1P39059 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL15A1P39059 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.51■□□□□ 0.55
COL15A1P39059 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC18.51■□□□□ 0.55
COL15A1P39059 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL15A1P39059 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms