Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.96■□□□□ 0.31
CLCN1P35523 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN1P35523 AL607033.1-201ENST00000623900 1599 ntBASIC16.96■□□□□ 0.31
CLCN1P35523 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.96■□□□□ 0.31
CLCN1P35523 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN1P35523 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN1P35523 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN1P35523 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN1P35523 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CLCN1P35523 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLCN1P35523 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CLCN1P35523 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CLCN1P35523 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CLCN1P35523 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.96■□□□□ 0.3
CLCN1P35523 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CLCN1P35523 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLCN1P35523 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLCN1P35523 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLCN1P35523 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CLCN1P35523 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 STK40-201ENST00000359297 4837 ntTSL 2 BASIC16.95■□□□□ 0.3
CLCN1P35523 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CLCN1P35523 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLCN1P35523 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 FO393414.2-201ENST00000405153 598 ntBASIC16.95■□□□□ 0.3
CLCN1P35523 MIR1233-2-201ENST00000408138 82 ntBASIC16.95■□□□□ 0.3
CLCN1P35523 MIR1233-1-201ENST00000408722 82 ntBASIC16.95■□□□□ 0.3
CLCN1P35523 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CLCN1P35523 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.95■□□□□ 0.3
CLCN1P35523 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.95■□□□□ 0.3
CLCN1P35523 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLCN1P35523 AL079307.3-201ENST00000556114 283 ntBASIC16.95■□□□□ 0.3
CLCN1P35523 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.95■□□□□ 0.3
CLCN1P35523 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.95■□□□□ 0.3
CLCN1P35523 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.95■□□□□ 0.3
CLCN1P35523 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CLCN1P35523 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.95■□□□□ 0.3
CLCN1P35523 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLCN1P35523 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC16.95■□□□□ 0.3
CLCN1P35523 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.95■□□□□ 0.3
CLCN1P35523 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN1P35523 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CLCN1P35523 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.94■□□□□ 0.3
CLCN1P35523 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CLCN1P35523 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC16.94■□□□□ 0.3
CLCN1P35523 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC16.94■□□□□ 0.3
CLCN1P35523 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CLCN1P35523 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CLCN1P35523 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.94■□□□□ 0.3
CLCN1P35523 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.94■□□□□ 0.3
CLCN1P35523 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.94■□□□□ 0.3
CLCN1P35523 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.94■□□□□ 0.3
CLCN1P35523 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.94■□□□□ 0.3
CLCN1P35523 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.94■□□□□ 0.3
CLCN1P35523 AC022447.6-201ENST00000515522 438 ntBASIC16.94■□□□□ 0.3
CLCN1P35523 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.94■□□□□ 0.3
CLCN1P35523 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CLCN1P35523 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CLCN1P35523 AL691403.2-201ENST00000618460 490 ntBASIC16.94■□□□□ 0.3
CLCN1P35523 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CLCN1P35523 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.94■□□□□ 0.3
CLCN1P35523 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLCN1P35523 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLCN1P35523 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC16.94■□□□□ 0.3
CLCN1P35523 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms