Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC10.98□□□□□ -0.65
CKS2P33552 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC10.98□□□□□ -0.65
CKS2P33552 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC10.98□□□□□ -0.65
CKS2P33552 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.98□□□□□ -0.65
CKS2P33552 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC10.98□□□□□ -0.65
CKS2P33552 BMF-207ENST00000559701 630 ntTSL 3 BASIC10.98□□□□□ -0.65
CKS2P33552 TBCB-211ENST00000589996 724 ntTSL 3 BASIC10.98□□□□□ -0.65
CKS2P33552 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
CKS2P33552 AC074044.1-201ENST00000609673 707 ntBASIC10.98□□□□□ -0.65
CKS2P33552 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC10.98□□□□□ -0.65
CKS2P33552 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC10.98□□□□□ -0.65
CKS2P33552 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
CKS2P33552 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CKS2P33552 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
CKS2P33552 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC10.98□□□□□ -0.65
CKS2P33552 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC10.98□□□□□ -0.65
CKS2P33552 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
CKS2P33552 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC10.98□□□□□ -0.65
CKS2P33552 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CKS2P33552 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
CKS2P33552 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC10.98□□□□□ -0.65
CKS2P33552 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC10.98□□□□□ -0.65
CKS2P33552 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
CKS2P33552 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC10.97□□□□□ -0.65
CKS2P33552 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 AC020658.7-201ENST00000624274 2442 ntBASIC10.97□□□□□ -0.65
CKS2P33552 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC10.97□□□□□ -0.65
CKS2P33552 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
CKS2P33552 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
CKS2P33552 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC10.97□□□□□ -0.65
CKS2P33552 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC10.97□□□□□ -0.65
CKS2P33552 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
CKS2P33552 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC10.97□□□□□ -0.65
CKS2P33552 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC10.97□□□□□ -0.65
CKS2P33552 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC10.97□□□□□ -0.65
CKS2P33552 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
CKS2P33552 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
CKS2P33552 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC10.97□□□□□ -0.65
CKS2P33552 USP40-206ENST00000443711 628 ntTSL 2 BASIC10.97□□□□□ -0.65
CKS2P33552 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC10.97□□□□□ -0.65
CKS2P33552 AC074386.1-202ENST00000463561 864 ntBASIC10.97□□□□□ -0.65
CKS2P33552 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC10.97□□□□□ -0.65
CKS2P33552 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC10.97□□□□□ -0.65
CKS2P33552 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 SLED1-202ENST00000512051 380 ntBASIC10.97□□□□□ -0.65
CKS2P33552 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC10.97□□□□□ -0.65
CKS2P33552 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
CKS2P33552 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC10.97□□□□□ -0.65
CKS2P33552 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC10.97□□□□□ -0.65
CKS2P33552 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC10.97□□□□□ -0.65
CKS2P33552 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC10.97□□□□□ -0.65
CKS2P33552 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC10.97□□□□□ -0.65
CKS2P33552 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC10.97□□□□□ -0.65
CKS2P33552 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC10.97□□□□□ -0.65
CKS2P33552 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
CKS2P33552 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
CKS2P33552 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC10.97□□□□□ -0.65
CKS2P33552 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
CKS2P33552 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
CKS2P33552 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 AC020910.6-201ENST00000623084 1459 ntBASIC10.97□□□□□ -0.65
CKS2P33552 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CKS2P33552 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
CKS2P33552 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms