Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.83□□□□□ -0.2
UBL4AP11441 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBL4AP11441 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBL4AP11441 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.83□□□□□ -0.2
UBL4AP11441 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
UBL4AP11441 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBL4AP11441 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.83□□□□□ -0.2
UBL4AP11441 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
UBL4AP11441 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBL4AP11441 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.83□□□□□ -0.2
UBL4AP11441 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.83□□□□□ -0.2
UBL4AP11441 ACTG1P3-201ENST00000431775 1114 ntBASIC13.83□□□□□ -0.2
UBL4AP11441 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.83□□□□□ -0.2
UBL4AP11441 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.83□□□□□ -0.2
UBL4AP11441 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.83□□□□□ -0.2
UBL4AP11441 RN7SL692P-201ENST00000464677 288 ntBASIC13.83□□□□□ -0.2
UBL4AP11441 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
UBL4AP11441 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBL4AP11441 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.83□□□□□ -0.2
UBL4AP11441 MIR5189-201ENST00000577370 114 ntBASIC13.83□□□□□ -0.2
UBL4AP11441 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBL4AP11441 AL358472.5-202ENST00000641448 1267 ntBASIC13.83□□□□□ -0.2
UBL4AP11441 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.83□□□□□ -0.2
UBL4AP11441 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
UBL4AP11441 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBL4AP11441 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
UBL4AP11441 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
UBL4AP11441 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBL4AP11441 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBL4AP11441 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBL4AP11441 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBL4AP11441 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBL4AP11441 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBL4AP11441 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.83□□□□□ -0.2
UBL4AP11441 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBL4AP11441 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBL4AP11441 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBL4AP11441 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBL4AP11441 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.82□□□□□ -0.2
UBL4AP11441 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
UBL4AP11441 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.82□□□□□ -0.2
UBL4AP11441 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
UBL4AP11441 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.82□□□□□ -0.2
UBL4AP11441 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.82□□□□□ -0.2
UBL4AP11441 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
UBL4AP11441 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
UBL4AP11441 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 AC006504.5-208ENST00000588784 2401 ntBASIC13.82□□□□□ -0.2
UBL4AP11441 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.82□□□□□ -0.2
UBL4AP11441 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
UBL4AP11441 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 AC005562.1-201ENST00000583030 3219 ntBASIC13.82□□□□□ -0.2
UBL4AP11441 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
UBL4AP11441 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.82□□□□□ -0.2
UBL4AP11441 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.82□□□□□ -0.2
UBL4AP11441 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.82□□□□□ -0.2
UBL4AP11441 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
UBL4AP11441 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
UBL4AP11441 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
UBL4AP11441 BAATP1-201ENST00000412284 1225 ntBASIC13.82□□□□□ -0.2
UBL4AP11441 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
UBL4AP11441 AC012441.1-201ENST00000446669 685 ntBASIC13.82□□□□□ -0.2
UBL4AP11441 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 AC026434.2-201ENST00000506094 1078 ntBASIC13.82□□□□□ -0.2
UBL4AP11441 AC068587.3-201ENST00000526613 355 ntBASIC13.82□□□□□ -0.2
UBL4AP11441 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
UBL4AP11441 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.82□□□□□ -0.2
UBL4AP11441 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.82□□□□□ -0.2
UBL4AP11441 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.82□□□□□ -0.2
UBL4AP11441 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.82□□□□□ -0.2
UBL4AP11441 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.82□□□□□ -0.2
UBL4AP11441 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.82□□□□□ -0.2
UBL4AP11441 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms