Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.24□□□□□ -0.29
APOC1P02654 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
APOC1P02654 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.24□□□□□ -0.29
APOC1P02654 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.24□□□□□ -0.29
APOC1P02654 AL442647.2-201ENST00000429864 857 ntBASIC13.24□□□□□ -0.29
APOC1P02654 AC114812.1-204ENST00000449669 728 ntBASIC13.24□□□□□ -0.29
APOC1P02654 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.24□□□□□ -0.29
APOC1P02654 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.24□□□□□ -0.29
APOC1P02654 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.24□□□□□ -0.29
APOC1P02654 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 AC023310.3-201ENST00000557027 670 ntBASIC13.24□□□□□ -0.29
APOC1P02654 AC100756.1-201ENST00000562736 682 ntBASIC13.24□□□□□ -0.29
APOC1P02654 AC138749.3-201ENST00000567691 622 ntBASIC13.24□□□□□ -0.29
APOC1P02654 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.24□□□□□ -0.29
APOC1P02654 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.24□□□□□ -0.29
APOC1P02654 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
APOC1P02654 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.24□□□□□ -0.29
APOC1P02654 AC116165.1-201ENST00000611806 668 ntBASIC13.24□□□□□ -0.29
APOC1P02654 AC006538.3-201ENST00000612495 578 ntBASIC13.24□□□□□ -0.29
APOC1P02654 PRSS30P-206ENST00000641773 873 ntBASIC13.24□□□□□ -0.29
APOC1P02654 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.24□□□□□ -0.29
APOC1P02654 INTS4P1-203ENST00000641008 3683 ntBASIC13.24□□□□□ -0.29
APOC1P02654 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 AC099521.3-201ENST00000624251 2938 ntBASIC13.24□□□□□ -0.29
APOC1P02654 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.24□□□□□ -0.29
APOC1P02654 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
APOC1P02654 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.24□□□□□ -0.29
APOC1P02654 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.24□□□□□ -0.29
APOC1P02654 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.24□□□□□ -0.29
APOC1P02654 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.24□□□□□ -0.29
APOC1P02654 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.24□□□□□ -0.29
APOC1P02654 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
APOC1P02654 Z82170.1-201ENST00000625081 3192 ntBASIC13.24□□□□□ -0.29
APOC1P02654 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.24□□□□□ -0.29
APOC1P02654 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.23□□□□□ -0.29
APOC1P02654 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 TCAF1P1-201ENST00000414990 2232 ntBASIC13.23□□□□□ -0.29
APOC1P02654 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.23□□□□□ -0.29
APOC1P02654 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
APOC1P02654 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
APOC1P02654 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.23□□□□□ -0.29
APOC1P02654 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.23□□□□□ -0.29
APOC1P02654 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
APOC1P02654 AC087499.6-201ENST00000411576 835 ntBASIC13.23□□□□□ -0.29
APOC1P02654 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
APOC1P02654 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.23□□□□□ -0.29
APOC1P02654 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 INGX-202ENST00000489074 768 ntBASIC13.23□□□□□ -0.29
APOC1P02654 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.23□□□□□ -0.29
APOC1P02654 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.23□□□□□ -0.29
APOC1P02654 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.23□□□□□ -0.29
APOC1P02654 AC120045.2-201ENST00000567334 178 ntBASIC13.23□□□□□ -0.29
APOC1P02654 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.23□□□□□ -0.29
APOC1P02654 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.23□□□□□ -0.29
APOC1P02654 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.23□□□□□ -0.29
APOC1P02654 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.23□□□□□ -0.29
APOC1P02654 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 AC093726.1-201ENST00000608064 963 ntBASIC13.23□□□□□ -0.29
APOC1P02654 GPALPP1-207ENST00000611650 899 ntBASIC13.23□□□□□ -0.29
APOC1P02654 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.23□□□□□ -0.29
APOC1P02654 AL662799.1-202ENST00000614205 422 ntBASIC13.23□□□□□ -0.29
APOC1P02654 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.23□□□□□ -0.29
APOC1P02654 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.23□□□□□ -0.29
APOC1P02654 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
APOC1P02654 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.23□□□□□ -0.29
APOC1P02654 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms