Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
ZIC3O60481 AGGF1P1-201ENST00000509500 2073 ntBASIC13.3□□□□□ -0.28
ZIC3O60481 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.3□□□□□ -0.28
ZIC3O60481 AC106881.1-201ENST00000605849 3329 ntBASIC13.3□□□□□ -0.28
ZIC3O60481 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.3□□□□□ -0.28
ZIC3O60481 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.3□□□□□ -0.28
ZIC3O60481 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.3□□□□□ -0.28
ZIC3O60481 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
ZIC3O60481 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 DPM3-202ENST00000368399 517 ntBASIC13.3□□□□□ -0.28
ZIC3O60481 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.3□□□□□ -0.28
ZIC3O60481 MIR1247-201ENST00000408206 136 ntBASIC13.3□□□□□ -0.28
ZIC3O60481 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.3□□□□□ -0.28
ZIC3O60481 GPAA1P2-201ENST00000417923 928 ntBASIC13.3□□□□□ -0.28
ZIC3O60481 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.3□□□□□ -0.28
ZIC3O60481 AL645933.1-201ENST00000440087 609 ntBASIC13.3□□□□□ -0.28
ZIC3O60481 AC104073.2-201ENST00000453737 312 ntBASIC13.3□□□□□ -0.28
ZIC3O60481 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.3□□□□□ -0.28
ZIC3O60481 RPL18P13-201ENST00000478088 569 ntBASIC13.3□□□□□ -0.28
ZIC3O60481 SERPINA13P-202ENST00000478994 924 ntBASIC13.3□□□□□ -0.28
ZIC3O60481 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.3□□□□□ -0.28
ZIC3O60481 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.3□□□□□ -0.28
ZIC3O60481 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.3□□□□□ -0.28
ZIC3O60481 AC243960.2-201ENST00000600996 747 ntBASIC13.3□□□□□ -0.28
ZIC3O60481 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
ZIC3O60481 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.3□□□□□ -0.28
ZIC3O60481 AC004923.1-202ENST00000642106 209 ntBASIC13.3□□□□□ -0.28
ZIC3O60481 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.3□□□□□ -0.28
ZIC3O60481 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 AL008718.2-201ENST00000609206 1313 ntBASIC13.3□□□□□ -0.28
ZIC3O60481 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.3□□□□□ -0.28
ZIC3O60481 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
ZIC3O60481 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
ZIC3O60481 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
ZIC3O60481 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.3□□□□□ -0.28
ZIC3O60481 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 AC004899.1-201ENST00000424687 1714 ntBASIC13.3□□□□□ -0.28
ZIC3O60481 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
ZIC3O60481 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ZIC3O60481 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC3O60481 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ZIC3O60481 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ZIC3O60481 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 AC113367.3-201ENST00000508316 1912 ntBASIC13.29□□□□□ -0.28
ZIC3O60481 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 AL390755.1-201ENST00000623716 2027 ntBASIC13.29□□□□□ -0.28
ZIC3O60481 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.29□□□□□ -0.28
ZIC3O60481 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ZIC3O60481 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.29□□□□□ -0.28
ZIC3O60481 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
ZIC3O60481 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.29□□□□□ -0.28
ZIC3O60481 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.29□□□□□ -0.28
ZIC3O60481 NKAIN1P1-201ENST00000435754 582 ntBASIC13.29□□□□□ -0.28
ZIC3O60481 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.29□□□□□ -0.28
ZIC3O60481 KRT8P13-201ENST00000463294 1010 ntBASIC13.29□□□□□ -0.28
ZIC3O60481 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.29□□□□□ -0.28
ZIC3O60481 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.29□□□□□ -0.28
ZIC3O60481 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.29□□□□□ -0.28
ZIC3O60481 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 AC009884.2-201ENST00000603110 324 ntBASIC13.29□□□□□ -0.28
ZIC3O60481 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.29□□□□□ -0.28
ZIC3O60481 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 AL161772.1-201ENST00000610494 4412 ntBASIC13.29□□□□□ -0.28
ZIC3O60481 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.29□□□□□ -0.28
ZIC3O60481 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms