Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 AC007686.3-201ENST00000619017 3487 ntBASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 GRK6P1-201ENST00000400595 1711 ntBASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 RN7SKP175-201ENST00000408472 289 ntBASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 AC026954.1-201ENST00000429771 1293 ntBASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 AC119751.2-201ENST00000504529 210 ntBASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCMF1Q9P0J7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 LINC00552-201ENST00000625151 2579 ntBASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 MIR1202-201ENST00000408529 83 ntBASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 RPS2P32-201ENST00000439199 892 ntBASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 GCOM2-201ENST00000509133 1104 ntBASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.1□□□□□ -0.15
KCMF1Q9P0J7 OR10B1P-201ENST00000601666 907 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms