Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PHOX2BQ99453 CTSL-202ENST00000342020 933 ntTSL 2 BASIC15.1■□□□□ 0.01
PHOX2BQ99453 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 BCAS2P2-201ENST00000425064 674 ntBASIC15.1■□□□□ 0.01
PHOX2BQ99453 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.1■□□□□ 0.01
PHOX2BQ99453 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 RN7SL258P-201ENST00000478664 300 ntBASIC15.1■□□□□ 0.01
PHOX2BQ99453 LINC00634-202ENST00000505157 222 ntBASIC15.1■□□□□ 0.01
PHOX2BQ99453 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15.1■□□□□ 0.01
PHOX2BQ99453 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.1■□□□□ 0.01
PHOX2BQ99453 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.1■□□□□ 0.01
PHOX2BQ99453 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 AL157762.1-201ENST00000619612 415 ntBASIC15.1■□□□□ 0.01
PHOX2BQ99453 AL645728.2-202ENST00000641679 227 ntBASIC15.1■□□□□ 0.01
PHOX2BQ99453 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.1■□□□□ 0.01
PHOX2BQ99453 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PHOX2BQ99453 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.1■□□□□ 0.01
PHOX2BQ99453 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC15.1■□□□□ 0.01
PHOX2BQ99453 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PHOX2BQ99453 AC022762.2-201ENST00000600308 1353 ntBASIC15.1■□□□□ 0.01
PHOX2BQ99453 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 AL592076.1-201ENST00000424448 303 ntBASIC15.09■□□□□ 0.01
PHOX2BQ99453 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 AC093909.3-201ENST00000504783 336 ntBASIC15.09■□□□□ 0.01
PHOX2BQ99453 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 FAM86B3P-203ENST00000523992 854 ntBASIC15.09■□□□□ 0.01
PHOX2BQ99453 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 AC009779.1-201ENST00000551138 283 ntBASIC15.09■□□□□ 0.01
PHOX2BQ99453 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 MIR4522-201ENST00000584932 87 ntBASIC15.09■□□□□ 0.01
PHOX2BQ99453 AL450472.2-201ENST00000603663 1156 ntBASIC15.09■□□□□ 0.01
PHOX2BQ99453 AL353622.2-201ENST00000605846 425 ntBASIC15.09■□□□□ 0.01
PHOX2BQ99453 AC025262.2-201ENST00000623975 1056 ntBASIC15.09■□□□□ 0.01
PHOX2BQ99453 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 FAM45BP-202ENST00000592932 1624 ntBASIC15.09■□□□□ 0.01
PHOX2BQ99453 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PHOX2BQ99453 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.09■□□□□ 0.01
PHOX2BQ99453 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.08■□□□□ 0.01
PHOX2BQ99453 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PHOX2BQ99453 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PHOX2BQ99453 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.08■□□□□ 0.01
PHOX2BQ99453 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.08■□□□□ 0.01
PHOX2BQ99453 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PHOX2BQ99453 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PHOX2BQ99453 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PHOX2BQ99453 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PHOX2BQ99453 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
PHOX2BQ99453 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.08■□□□□ 0
PHOX2BQ99453 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PHOX2BQ99453 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC15.08■□□□□ 0
PHOX2BQ99453 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms