Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 AL596276.2-201ENST00000447525 331 ntBASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 AL161670.2-201ENST00000557650 1227 ntBASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 AC020922.3-201ENST00000595064 547 ntBASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 AL136172.1-201ENST00000598590 1394 ntBASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 AC009884.2-201ENST00000603110 324 ntBASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 AC006486.2-201ENST00000624246 2199 ntBASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 DBET-201ENST00000630918 3363 ntBASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC85AQ96PX6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 FAS-202ENST00000352159 1722 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 AC007274.2-201ENST00000421675 662 ntBASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 PDIA3P2-201ENST00000428073 158 ntBASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 FAM58BP-201ENST00000439056 645 ntBASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 EEF1DP6-201ENST00000449232 372 ntBASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 AC116345.2-201ENST00000512837 523 ntBASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 RTN3P1-201ENST00000536295 711 ntBASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 NAP1L6-202ENST00000641404 1222 ntBASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC85AQ96PX6 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 AC144522.1-201ENST00000625111 1658 ntBASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 AC006122.1-201ENST00000493323 440 ntBASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 RN7SL190P-201ENST00000582519 257 ntBASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 AC012044.1-201ENST00000603431 297 ntBASIC18.34■□□□□ 0.53
CCDC85AQ96PX6 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms