Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 OR8S1-201ENST00000310194 1080 ntBASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 AC004890.2-204ENST00000481968 304 ntBASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 IGHV3-42-201ENST00000520410 361 ntBASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 AC005498.2-205ENST00000593218 784 ntBASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 LINC02486-201ENST00000604157 3000 ntBASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 AC241585.1-201ENST00000433527 519 ntBASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 RN7SL399P-201ENST00000471648 279 ntBASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 INGX-202ENST00000489074 768 ntBASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 TERF1P3-201ENST00000505638 1227 ntBASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 AC015911.4-201ENST00000588022 1070 ntBASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 STK3-218ENST00000617590 2485 ntTSL 5 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHAMP1Q96JM3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.23■□□□□ 0.35
CHAMP1Q96JM3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CHAMP1Q96JM3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CHAMP1Q96JM3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHAMP1Q96JM3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms